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. 2015 Jun 26;10(1):51–63. doi: 10.1038/ismej.2015.104

Table 1. List of algal strains and samples used for 16S metabarcoding experiments.

Name Sex Origin Year Isolator ITS accession Culture medium Growth in DSWM Culture medium
Alga
                No. samples Dsim No. OTUs No. samples Dsim No. OTUs
371 Sp Hopkins River, AUS 1995 J West FR668844 SWM Yes 1 0.15 43 3 0.13-0.16 74-84
            DSWM Yes 1 0.18 95 3 0.13-0.18 71-80
Bft 1a f Beaufort, USA 1978 DG Müller FR668733 SWM No 1 0.34 39 1 0.19 61
Bft 15b m Beaufort, USA 1978 DG Müller FR668734 SWM No 1 0.14 76 1 0.33 53
Par 10b f Port Aransas, USA 1978 DG Müller FR668791 SWM No 1 0.50 51 1 -c 19c
PAr 10n_2 f Port Aransas, USA 1978 DG Müller FR668792 SWM Yes 1 0.14 72 1 0.12 48
PAr 27a m Port Aransas, USA 1978 DG Müller FR668795 SWM Yes 1 0.20 53 1 0.12 54
PAr 1027 sp Port Aransas, USA 1978 DG Müller unpublished SWM No 1 0.35 69 1 0.27 59
Tam 2b m Tampa, USA 1978 DG Müller FR668803 SWM Yes 1 0.53 51 1 0.22 67
Tam 12b m Tampa, USA 1978 DG Müller FR668804 SWM No 1 0.37 56 1 0.50 52
Tam 18b f Tampa, USA 1978 DG Müller FR668805 SWM Yes 1 0.27 85 1 0.27 33
Tam 19c m Tampa, USA 1978 DG Müller FR668806 SWM C.d. 1 0.24 59 1 0.20 67
Grh 6c sp Grinhigen, SW 1979 DG Müller FR668907 SWM C.d. 1 0.17 40 1 0.39 39
Kal 1c sp Killvik, SW 1979 DG Müller FR668909 SWM Yes 1 0.65 64 1 0.16 59
Bri_1 sp Pill, UK 2008 AF Peters unpublished SWM Yes 1 0.37 56 1 0.70 68
Bri_3 sp Pill, UK 2008 AF Peters unpublished SWM Yes 1 0.17 54 1 0.13 60
DEV11_1a m Kingsbridge, UK 2011 AF Peters unpublished SWM No 1 0.43 49 1 0.21 60
Ter11_1 sp Terenez, FR 2011 AF Peters unpublished SWM No 1 0.27 61 1 0.17 60
Ter11_2 sp Terenez, FR 2011 AF Peters unpublished SWM Yes 1 0.20 68 1 0.09 33
Rsa001 sp Muizenberg, RSA 2004 D Schroeder unpublished SWM Yes 1 0.31 52 1 0.70 35
Rsa002 Sp Muizenberg, RSA 2004 D Schroeder unpublished SWM Yes 1 0.13 58 1 -c 31c
Ec32b m San Juan de Marcona, Peru 1988 AF Peters genome SWM C.d. 1 0.18 56 1 0.17 59

Abbreviations: DSWM, diluted seawater medium; f, female strain; ITS, internal transcribed spacer; m, male strain; OTU, operational taxonomic unit; sp, heterozygous sporophytes; SWM, seawater medium. The capacity of a strain to grow in DSWM was determined in a separate experiment with three biological replicates. ‘C.d.'=cell death, that is, cultures showed clear bleaching after 5 weeks of exposure.

a

This strain is likely to represent a species different from the remaining strains, despite high phenotypic similarity.

b

This strain is the genome-sequenced purely marine strain of E. siliculosus.

c

For these samples, less than 7891 sequences were obtained and no diversity-index was calculated.