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. 2015 Dec 17;5:17936. doi: 10.1038/srep17936

Table 1. Residues related to antigen–antibody binding.

TRAIL-R2
 
KMTR2
epitope residue atom distance atom residue CDR chain
1 Ilu87 Cγ2 3.73   Trp94 3 L
Glu89 O 2.96 h Nε1 Trp50 2 H
3.89   Lys33 1
Oε1 3.07 h  
  2.72 h N Gly103 3
Oε2 3.24 h Lys33 1
water mediated h Nε1 Trp50 2
water mediated h N Asn52
water mediated h Ser57
Asp90 N water mediated h O Thr58
3.84   Gly59
C 3.91   Cε2 Trp94 3 L
Gly91 3.61   Cδ1
2 Asp102 Oδ2 2.97 h Nη1 Arg107 3 H
water mediated h Nη2
His106 Nε2 water mediated h Nε2 Gln27 1 L
water mediated h Nδ2 Asm93 3
Asp109 N water mediated h
O 2.85 h N Trp94
Oδ1 2.65 h Nδ2 Asn93
Oδ2 water mediated h O Trp94
  water mediated h N Glu1
Leu111 N 2.87 h O Ser92 3
3.96   Cε1 Tyr106 3 H
Cδ1 3.82   Trp94 3 L
Cδ2 3.67   C Asn93
  3.70   Cδ1 Leu96
Phe112 Cδ1 3.71   Cδ1 Tyr106 3 H
  3.55   Arg107
Cε2 3.52   Cε1 Tyr32 1 L
3.73   Ser92 3
Cys113 O 2.78 h Nη1 Arg107 3 H
Arg115 N water mediated h Tyr32 1 L
3.27   Arg107 3 H
Nη1 3.24 h Oδ2 Arg108
water mediated h Tyr32 1 L
water mediated h O Arg107 3 H

h: hydrogen bond (within 3.6 Å between donor and acceptor).