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. 2015 Dec 9;16(Suppl 18):S13. doi: 10.1186/1471-2105-16-S18-S13

Table 2.

Statistics of contigs, Sanger sequences, and their alignments.

(a) Contig lengths of four known bacteria in three test samples.
Sample Length of longest contig (bp)

Legionella Chryseobacterium Pseudomonas Bacillus

S1 780 1483 1468 479

S2 1143 1052 1193 N.A.

S3 1487 N.A. N.A. 845

(b) Results of BLAST alignments between each contig and the Sanger sequence.

Genus Sanger (bp) Identity (%); mismatch; gap

S1 S2 S3

Legionella 832 99.8; 0; 1 99.6; 0; 2 99.6; 0; 2

Chryseobacterium 1126 100; 0; 0 100; 0; 0 N.A.

Psuedomonas 1529 100; 0; 0 99.8; 1; 1 N.A.