Table 3.
Species | #Sequence | Region | #Genotype | Number (%) of Genotype Discrepancies | References | |
---|---|---|---|---|---|---|
EVIDENCE | RIVM Genotyping Tool | |||||
Enterovirus A | 49 | 5'UTR | 2 | 0 | 49 (100%) (49 only typed to species level) |
[72] |
59 | VP1 | 8 | 0 | 0 | [27,28,52,53] | |
3 | CG | 3 | 0 | 0 | [53] | |
Enterovirus B | 101 | VP1/VP2 | 22 | 6 (5.9%) (4 seqs typed to species level, 2 mistyped) |
6 (5.9%) (4 seqs typed to species level, 2 mistyped) |
[27,28,52] |
Enterovirus C | 13 | VP1 | 6 | 1 (7.7%) (mistyped) |
2 (15.4%) (1 seq typed to species level, 1 mistyped) |
[27,28] |
Rhinovirus A | 1 | VP1 | 1 | 0 | 1 (100%) (1 seq typed to species level) |
[28] |
Untypeable | 5 | VP1 | NA | 5 (100%) (5 successfully typed) |
5 (100%) (1 seq typed to species level, 4 successfully typed) |
[28] |