Skip to main content
. 2015 Dec 9;16(Suppl 18):S1. doi: 10.1186/1471-2105-16-S18-S1

Table 3.

Best performing models for feature set sizes ranging from 10 to 38.

AGA Run Parameters and Result Random Stepwise
# Size Rho Subset Immi- grants Generations Feature set** AUC AUC AUC

1 10 0.6 None 30 300 Set_10 0.83 0.59 0.76

2 14 0.1* Quartile N/A 300 Set_14 0.85 0.60 0.78

3 18 0.1* Quartile N/A 300 Set_18 0.86 0.59 0.79

4 22 0.1* Quartile N/A 300 Set_22 0.87 0.59 0.80

5 26 0* Quartile N/A 300 Set_26 0.88 0.60 0.81

6 30 0* Quartile N/A 300 Set_30 0.89 0.59 0.82

7 34 0.2 None 30 600 Set_34 0.88 0.59 0.82

8 38 0 None 30 300 Set_38 0.85 0.60 0.82

* Penalty applied to the AGA started with only "best quartile" subset.

** Included features can be found in Additional File 4: Table S2.

The results were compared with models from the randomly selected feature sets (same sizes) and stepwise selected models