Table 1. Sampling design and information on the NGS and plastome data.
Species | Accession number | Data size (Gb) | Number of reads | Coverage of plastome | Plastome size (bp) |
---|---|---|---|---|---|
Vitis flexuosa | Wen 12461 | 3.52 | 23,496,856 | 1,689 | 160,964 |
Vitis riparia | Wen 12695 | 3.11 | 20,763,492 | 1,671 | 161,011 |
Vitis vinifera | N/A | N/A | NC_007957 | N/A | 160,928 |
Vitis rotundifolia var. munsoniana | Wen 12195 | 2.12 | 14,118,242 | 1,178 | 161,275 |
Pterisanthes heterantha | Wen 11820 | 2.95 | 19,648,540 | 773 | 155,700 |
Ampelocissus ascendiflora | Wen 11822 | 2.97 | 19,825,858 | 880 | 155,686 |
Parthenocissus vitacea | Wen 11976 | 2.70 | 17,988,788 | 679 | 161,640 |
Parthenocissus heptaphylla | Wen 11985 | 2.80 | 18,672,228 | 1,133 | 161,467 |
Tetrastigma sp. nov. | Wen 2011-fujian | 3.12 | 20,780,600 | 1,064 | 156,880 |
Tetrastigma raffesiae | Wen 11824 | 2.57 | 17,137,048 | 161 | 160,089* |
Tetrastigma lawsonii | Wen 11680 | 2.67 | 17,809,412 | 602 | 160,232* |
Tetrastigma voinierianum | Wen 12–012 | 3.01 | 20,078,184 | 142 | 159,986* |
Cayratia japonica | Wen UNI68 | 2.71 | 18,063,906 | 829 | 158,240* |
Cyphostemma juttae | Wen 2010–093 | 2.31 | 15,375,710 | 480 | 159,245 |
Cyphostemma humile | Wen 2010–090 | 2.15 | 14,353,720 | 136 | 158,800 |
Cyphostemma sandersonii | Wen 2010–094 | 2.17 | 14,450,758 | 724 | 159,196 |
Cyphostemma adenopoda | Wen UC Davis | 2.47 | 16,487,240 | 400 | 159,495 |
Cissus trifoliata | Wen 11977 | 2.35 | 15,641,708 | 2,006 | 160,220 |
Cissus tuberosa | Wen 2010–091 | 1.93 | 12,848,572 | 995 | 159,928 |
Cissus microcarpa | Wen 11954 | 2.80 | 18,638,058 | 307 | 160,390 |
Cissus discolor | Wen 12–011 | 3.11 | 20,737,692 | 953 | 158,713 |
Cissus quadrangularis | 2010–086 | 3.08 | 20,537,768 | 2,309 | 160,382 |
Cissus antarctica | Wen 2012–010 | 2.84 | 18,913,388 | 595 | 161,706* |
Ampelopsis aconitifolia | Wen 2010–078 | 3.62 | 24,125,332 | 1,883 | 162,649* |
Ampelopsis cordata | Wen 12620 | 2.93 | 19,539,876 | 879 | 161,955* |
Rhoicissus digitata | Wen 2010–097 | 2.51 | 16,705,996 | 681 | 160,619* |
Nekemias arborea | Wen 12005 | 3.23 | 21,529,740 | 713 | 162,625* |
Leea guineensis | Wen 2010–095 | 2.45 | 16,356,482 | 254 | 160,555* |
*: small gaps were not bridged for this plastid genome