A–Leaky integrate and fire model summary
|
Populations
|
excitatory, inhibitory |
Topology
|
- |
Connectivity
|
Random and sparse |
Neuron model
|
Leaky integrate and fire, fixed threshold, fixed refractory time |
Synapse model
|
Difference of exponential functions defined by rise and decay time.Current-based synapses. |
Plasticity
|
- |
Input
|
Sum of independent Poisson processes with same time-varying rate for all neurons |
Measurements
|
For each population: firing rate, GABA and AMPA currents, membrane potential |
B–Populations
|
Type
|
Elements
|
Interneurons (GABA synapses) |
LIF neurons |
Pyramidal neurons (AMPA synapses) |
LIF neurons |
C–Connectivity
|
Name
|
Source
|
Target
|
Pattern
|
AMPA_cor-Pyr |
Pyramidal |
Pyramidal |
dir. conn. pdc weight: JAMPA_cor/pyr
|
AMPA_cor-Inter |
Pyramidal |
Interneuron |
dir. conn. pdc weight: JAMPA_cor/inter
|
GABA-Pyr |
Interneuron |
Pyramidal |
dir. conn. pdc weight: JGABA/pyr
|
GABA-Inter |
Interneuron |
Interneuron |
dir. conn. pdc weight: JGABA/inter
|
AMPA_th-Pyr |
External |
Pyramidal |
Uniform, JAMPA_th/pyr
|
AMPA_th-Inter |
External |
Interneuron |
Uniform, JGABA_th/pyr
|
D- Neuron
|
Type
|
Leaky integrate and fire
|
Description
|
Subthreshold dynamics:
|
|
If V
m
>V
thr & t>t*+τ
refractory
|
|
{t* = t; spike emitted with time stamp t*; Vm = Vreset} |
E–Synapse
|
Type
|
Current synapse
|
Description
|
|
|
|
F–Input
|
Type
|
Description
|
Poisson |
“Thalamic”: time-constant input with rate λ. |
Poisson |
“Long range cortico-cortical”: Ornstein Uhnlenbeck process (OU) with zero mean |
|
|
|
where W is a white noise process with zero mean |
G–Measurements (for each population)
|
Type
|
Description
|
Firing rate |
Sum of spikes |
AMPA |
Sum of AMPA PSCs (cortical and thalamic) |
GABA |
Sum of GABA PSCs |
Vm
|
Mean of membrane potential |
ΣI |
Sum of AMPA and GABA PSCs. Note that AMPA and GABA have opposite signs. |
ΣI| |
Sum of absolute values of AMPA and GABA PSCs. |
Weighted Sum (WS) |
|
Reference Weighted Sum (RWS) |
|