Table 2. miRNAs where dominant isomiR is at least 3 times more abundant than the canonical form.
name | Canonical sequence | variant | Can. reads | Total reads | Can. frac | Dom. frac |
---|---|---|---|---|---|---|
bta-miR-16b | TAGCAGCACGTAAATATTGGC | mlv3p | 69 | 1706 | 0.04 | 0.96 |
bta-miR-30c | TGTAAACATCCTACACTCTCAGC | mlv3p | 273 | 3073 | 0.09 | 0.83 |
bta-miR-103 | AGCAGCATTGTACAGGGCTATGA | lv3p | 719 | 9198 | 0.08 | 0.80 |
bta-miR-23b-3p | ATCACATTGCCAGGGATTACCAC | lv3p | 122 | 585 | 0.21 | 0.79 |
bta-miR-326 | CCTCTGGGCCCTTCCTCCAG | nta#T | 91 | 1086 | 0.08 | 0.65 |
bta-miR-22-3p | AAGCTGCCAGTTGAAGAACTG | lv3p | 1704 | 72239 | 0.02 | 0.61 |
bta-miR-125a | TCCCTGAGACCCTTTAACCTGTG | lv3p | 153 | 2305 | 0.07 | 0.58 |
bta-miR-125b | TCCCTGAGACCCTAACTTGTGA | lv3p | 142 | 1466 | 0.10 | 0.51 |
bta-miR-140 | TACCACAGGGTAGAACCACGGA | mv | 99 | 1235 | 0.08 | 0.50 |
bta-miR-100 | AACCCGTAGATCCGAACTTGTG | lv3p | 233 | 2235 | 0.10 | 0.50 |
bta-miR-93 | CAAAGTGCTGTTCGTGCAGGTA | lv3p | 95 | 1046 | 0.09 | 0.46 |
bta-miR-342 | TCTCACACAGAAATCGCACCCATCT | lv3p | 126 | 993 | 0.13 | 0.44 |
bta-miR-10b | TACCCTGTAGAACCGAATTTGTG | lv3p | 1063 | 20986 | 0.05 | 0.42 |
bta-miR-423-3p | AAGCTCGGTCTGAGGCCCCTCAGT | lv5p | 1596 | 39823 | 0.04 | 0.40 |
bta-miR-181a | AACATTCAACGCTGTCGGTGAGTT | lv3p | 2436 | 41895 | 0.06 | 0.38 |
bta-miR-10a | TACCCTGTAGATCCGAATTTGTG | lv3p | 474 | 11223 | 0.04 | 0.37 |