Table 2.
All | Avinières (n = 18) | Saint Bresson (n = 22) | Saint Hippolyte (n = 17) | Coulet (n = 17) | |||||||||||||||||
Locus | % amp | A | Ho | He | FISb | A | Ho | He | FISb | A | Ho | He | FISb | A | Ho | He | FISb | A | Ho | He | FISb |
Ncpm09 | 100 | 16 | 0.563 | 0.699 | 0.108 | 8 | 0.722 | 0.794 | 0.091 | 5 | 0.545 | 0.598 | 0.089 | 10 | 0.823 | 0.893 | 0.078 | 6 | 0.353 | 0.46 | 0.232 |
Ncpm13 | 100 | 5 | 0.260 | 0.346 | 0.130 | 3 | 0.500 | 0.606 | 0.175 | 3 | 0.500 | 0.530 | 0.057 | 1 | 0.000 | 0.000 | NA | 4 | 0.176 | 0.224 | 0.213 |
Ncpm21 | 100 | 9 | 0.505 | 0.570 | 0.136 | 4 | 0.500 | 0.556 | 0.10 | 5 | 0.682 | 0.639 | −0.068 | 3 | 0.412 | 0.588 | 0.300 | 3 | 0.294 | 0.449 | 0.344 |
Ncpm23 | 100 | 9 | 0.444 | 0.557 | 0.199 | 4 | 0.389 | 0.562 | 0.308 | 3 | 0.409 | 0.427 | 0.043 | 5 | 0.412 | 0.566 | 0.273 | 4 | 0.529 | 0.638 | 0.170 |
Ncpm31 | 98.6 | 9 | 0.493 | 0.694 | 0.396 | 6 | 0.667 | 0.771 | 0.136 | 4 | 0.111 | 0.645 | 0.828* | 5 | 0.412 | 0.763 | 0.460 | 5 | 0.529 | 0.658 | 0.196 |
Ncpm07 | 98.6 | 8 | 0.485 | 0.606 | 0.210 | 6 | 0.833 | 0.725 | −0.149 | 2 | 0.364 | 0.359 | −0.012 | 3 | 0.062 | 0.383 | 0.837* | 5 | 0.412 | 0.717 | 0.426 |
Ncpm14 | 100 | 5 | 0.254 | 0.405 | 0.357 | 3 | 0.500 | 0.650 | 0.231 | 2 | 0.091 | 0.089 | −0.024 | 3 | 0.235 | 0.318 | 0.260 | 2 | 0.059 | 0.346 | 0.830 |
Ncpm19 | 100 | 11 | 0.544 | 0.647 | 0.130 | 5 | 0.722 | 0.730 | 0.011 | 4 | 0.591 | 0.639 | 0.075 | 2 | 0.187 | 0.425 | 0.559 | 7 | 0.706 | 0.774 | 0.088 |
Ncpm29 | 100 | 9 | 0.579 | 0.733 | 0.174 | 6 | 0.611 | 0.753 | 0.189 | 6 | 0.773 | 0.696 | −0.110 | 7 | 0.529 | 0.833 | 0.364 | 5 | 0.529 | 0.746 | 0.291 |
Nc02 | 97.3 | 6 | 0.384 | 0.482 | 0.081 | 5 | 0.750 | 0.693 | −0.042 | 4 | 0.273 | 0.290 | 0.060 | 1 | 0.000 | 0.000 | NA | 5 | 0.562 | 0.727 | 0.226 |
Nc03 | 98.6 | 4 | 0.296 | 0.467 | 0.316 | 3 | 0.350 | 0.292 | −0.14 | 4 | 0.429 | 0.699 | 0.387 | 2 | 0.059 | 0.059 | 0.000 | 4 | 0.375 | 0.7 | 0.464 |
Nc04 | 100 | 9 | 0.528 | 0.618 | 0.125 | 6 | 0.700 | 0.778 | 0.143 | 4 | 0.318 | 0.290 | −0.097 | 4 | 0.647 | 0.695 | 0.069 | 5 | 0.529 | 0.732 | 0.276 |
Nc06b | 100 | 18 | 0.582 | 0.740 | 0.233 | 9 | 0.700 | 0.815 | 0.046 | 7 | 0.636 | 0.812 | 0.216 | 7 | 0.437 | 0.627 | 0.302 | 5 | 0.412 | 0.717 | 0.426 |
Nc07b | 98.6 | 5 | 0.501 | 0.592 | 0.194 | 4 | 0.500 | 0.672 | 0.255 | 4 | 0.571 | 0.570 | −0.002 | 4 | 0.471 | 0.498 | 0.055 | 3 | 0.294 | 0.57 | 0.484 |
Nc19 | 97.3 | 8 | 0.585 | 0.628 | 0.073 | 5 | 0.684 | 0.768 | 0.158 | 5 | 0.762 | 0.698 | −0.092 | 5 | 0.529 | 0.686 | 0.228 | 4 | 0.562 | 0.575 | 0.022 |
Nc20 | 97.3 | 9 | 0.269 | 0.330 | 0.305 | 4 | 0.600 | 0.544 | −0.021 | 6 | 0.619 | 0.664 | 0.068 | 1 | 0.000 | 0.000 | NA | 3 | 0.125 | 0.235 | 0.469 |
Nc22 | 100 | 6 | 0.347 | 0.522 | 0.305 | 2 | 0.150 | 0.157 | −0.063 | 5 | 0.727 | 0.778 | 0.065 | 2 | 0.235 | 0.507 | 0.536 | 3 | 0.235 | 0.605 | 0.611 |
Note: % amp = percentage of successful amplification; A = number of alleles; FIS = intrapopulation fixation index; He = expected heterozygosity; Ho = observed heterozygosity; NA = not available.
Information on geographic locations and vouchers is provided in Appendix 1.
FIS values significantly different from zero after Bonferroni correction (P < 0.0006) are indicated with an asterisk.