Table 5.
Candidate | Start position | Stop position | Strand | −10 box | −35 box |
---|---|---|---|---|---|
2 | 163641 | 163556 | Anti-sense | ATCTAGGAT | TTAATT |
5 | 659164 | 659057 | Anti-sense | TTGTATTAT | TTTATT |
6 | 644329 | 644199 | Anti-sense | TAGTAAAAA | TTAGAA |
9 | 457001 | 456876 | Sense | ACTTATCAT | TTGCTG |
10 | 371859 | 371506 | Anti-sense | TGTTAAAAT | TTTATT |
11 | 308324 | 308042 | Anti-sense | TTTTGAAAT | TTCTAA |
12 | 306070 | 305924 | Sense | ATGTATATT | TTGATG |
21 | 47692 | 47542 | Sense | GGGTATAAC | ATGACA |
22 | 10482 | 10278 | Anti-sense | ATGTAAGAT | TTTACT |
23 | 1105018 | 1104959 | Sense | GATCAGAAT | TTCAAA |
24 | 1039473 | 1039278 | Anti-sense | ATGTAGATT | TTGATT |
25 | 998167 | 997927 | Anti-sense | GACTAAAAT | TTGCCA |
This table outlines those R. prowazekii strain Breinl sRNA predictions that had an MEV ≥1.5. It includes the SIPHT predicted start and stop positions as well as the predicted strand. In addition, it contains the BPROM predicted −10 box and −35 box for the σ70 promoters