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. 2015 Dec 18;16:1075. doi: 10.1186/s12864-015-2293-7

Table 5.

sRNA predicted promoter locations

Candidate Start position Stop position Strand −10 box −35 box
2 163641 163556 Anti-sense ATCTAGGAT TTAATT
5 659164 659057 Anti-sense TTGTATTAT TTTATT
6 644329 644199 Anti-sense TAGTAAAAA TTAGAA
9 457001 456876 Sense ACTTATCAT TTGCTG
10 371859 371506 Anti-sense TGTTAAAAT TTTATT
11 308324 308042 Anti-sense TTTTGAAAT TTCTAA
12 306070 305924 Sense ATGTATATT TTGATG
21 47692 47542 Sense GGGTATAAC ATGACA
22 10482 10278 Anti-sense ATGTAAGAT TTTACT
23 1105018 1104959 Sense GATCAGAAT TTCAAA
24 1039473 1039278 Anti-sense ATGTAGATT TTGATT
25 998167 997927 Anti-sense GACTAAAAT TTGCCA

This table outlines those R. prowazekii strain Breinl sRNA predictions that had an MEV ≥1.5. It includes the SIPHT predicted start and stop positions as well as the predicted strand. In addition, it contains the BPROM predicted −10 box and −35 box for the σ70 promoters