Table 2. Merge of Differential Methylation and Differential Expression (All Histologies– 21 pairs).
Assay | Total # loci | FDR p < 0.05 |
HELP | 1135549 | 433666 |
Gene Expression | 18208 | 7957 |
Regions | Correlation | # of loci |
Promoter | Hypermethylated and Downregulated | 75 |
Hypomethylated and Upregulated | 38 | |
other | 3113 | |
Genebody | Hypermethylated and Upregulated | 219 |
Hypomethylated and Downregulated | 3753 | |
Other | 71542 | |
Total | 78740 |