Table 3. Merge of Differential Methylation and Differential Expression (Adenocarcinomas only).
Assay | Total # Loci | FDR p < 0.05 |
HELP | 1135549 | 225350 |
Gene Expression | 18208 | 6378 |
Regions | Correlation | # of loci |
Promoter | Hypermethylated and Downregulated | 64 |
Hypomethylated and Upregulated | 16 | |
other | 1239 | |
Genebody | Hypermethylated and Upregulated | 138 |
Hypomethylated and Downregulated | 2998 | |
Other | 32601 | |
Total | 37056 |