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. 2015 Dec 14;10(12):e0144591. doi: 10.1371/journal.pone.0144591

Table 1. Summary of targeted mutation screen of primary events and enrichment PCR results from callus.

Diploid (X914-10) and tetraploid (Désirée) genotypes were stably transformed with gRNA746 and gRNA751 CRISPR/Cas reagents in a conventional 35S or geminivirus LSL T-DNA backbone using hygromycin selection (Total events). A restriction enzyme digestion assay and quantification of resistant and digested bands were used to identify events with at least 1% mutation frequencies (# with mutations) and events above a threshold using expected single allele mutation frequencies (# above threshold) (S2 Table). Percentages are of total events and modified enrichment PCR results come from Fig 1B and S1 Table.

Genotype gRNA T-DNA Total events # with mutations % with mutations # above threshold % above threshold Modified Enrichment PCR
X914-10 746 35S 27 15 55% 4 15% +
X914-10 746 LSL 32 13 41% 1 3% -
X914-10 751 35S 35 3 9% 1 3% +
X914-10 751 LSL 39 1 3% 0 0% -
Désirée 746 35S 35 21 60% 10 29% +
Désirée 746 LSL 33 12 36% 0 0% -
Désirée 751 35S 37 4 11% 1 3% +
Désirée 751 LSL 21 1 5% 0 0% -