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. 2015 Dec 14;10(12):e0144674. doi: 10.1371/journal.pone.0144674

Table 1. Overview of sequencing and de novo assembly results of mRNA-Seq analyses using RNA collected from Pratylenchus penetrans.

Sample Total Bases Read Count GC (%) Q20 (%) Q30 (%)
Pool of nematodes (sample 1) 7,916,194,968 78,378,168 43.21 92.18 87.37
Pool of nematodes (sample 2) 7,202,319,696 71,310,096 43.84 93.56 87.65
Trinity assembly K = 25
n n: 100 n: N50 min median mean N50 max
de novo assembly 23,715 23,715 5,133 201 578 882 1,362 8,605

Only sequences >200 bp were considered for this analysis.