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. Author manuscript; available in PMC: 2016 Dec 1.
Published in final edited form as: Methods. 2015 Sep 14;91:35–39. doi: 10.1016/j.ymeth.2015.09.013

Fig. 1.

Fig. 1

Two conformational states of the subdomain IIa RNA switch from the IRES element of HCV as visualized by X-ray crystallography. Both structures contain three magnesium ions (light blue spheres). (A) The RNA switch adopts a bent fold in the ligand-free state. (B) An extended architecture of the RNA switch is captured by benzimidazole viral translation inhibitors and guanine which bind at a deeply encapsulating ligand binding site (yellow surface).