Table 1.
Gene | Primer | Primer sequence | Amplicon (bp) | Annealing temperature (°C) | References |
---|---|---|---|---|---|
K1 | K1-F | GTAGGTATTGCAAGCCATGC | 1047 | 55 | Fang et al., 2007 |
K1-R | GCCCAGGTTAATGAATCCGT | ||||
K2 | K2-F | GACCCGATATTCATACTTGACAGAG | 641 | 57 | Turton et al., 2008 |
K2-R | CCTGAAGTAAAATCGTAAATAGATGGC | ||||
K5 | K5-F | TGGTAGTGATGCTCGCGA | 280 | 55 | Turton et al., 2008 |
K5-R | CCTGAACCCACCCCAATC | ||||
K20 | K20-F | CGGTGCTACAGTGCATCATT | 741 | 55 | Fang et al., 2007 |
K20-R | GTTATACGATGCTCAGTCGC | ||||
K54 | K54-F | CATTAGCTCAGTGGTTGGCT | 881 | 55 | Fang et al., 2007 |
K54-R | GCTTGACAAACACCATAGCAG | ||||
K57 | K57-F | CTCAGGGCTAGAAGTGTCAT | 1037 | 55 | Fang et al., 2007 |
K57-R | CACTAACCCAGAAAGTCGAG | ||||
wcaG | wcaG-F | GGTTGGKTCAGCAATCGTA | 169 | 53 | Turton et al., 2010 |
wcaG-R | ACTATTCCGCCAACTTTTGC | ||||
rmpA | rmpA-F | ACTGGGCTACCTCTGCTTCA | 535 | 50 | Nadasy et al., 2007 |
rmpA-R | CTTGCATGAGCCATCTTTCA | ||||
magA | magA-F | GGTGCTCTTTACATCATTGC | 1282 | 53 | Fang et al., 2004 |
magA-R | GCAATGGCCATTTGCGTTAG | ||||
Aerobactin | Aerobactin-F | GCATAGGCGGATACGAACAT | 556 | 55 | Yu et al., 2008 |
Aerobactin-R | CACAGGGCAATTGCTTACCT |