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Number of transcripts detected by annotation classification reported by Cufflinks and cuffcompare.
| Cufflinks transcripts | Control | Cd+ | Cd++ |
|---|---|---|---|
| Total reference transcripts (T) | 113,001 | ||
| Known reference transcripts (K) (K/T%) | 36,923 (32.7%) | 37,028 (32.8%) | 36,743 (32.5%) |
| Novel isoform transcripts (N) | 8906 | 8868 | 8950 |
| Antisense transcripts (A) | 166 | 175 | 157 |
| Intergenic transcripts (I) | 721 | 732 | 810 |
