Table 1.
| Gene | Expression level a | Orientation b (nearest mRNA) | Convergent mRNA RT? | Convergent ncRNA RT? | Tandem RT? |
|---|---|---|---|---|---|
| NPL3 | -6.17 | N/A | |||
| YRO2 | -4.22 | C | Y | Y | |
| THO1 | -3.44 | C | Y | ||
| HXT1 | -3.34 | T | Y d | ||
| PTC7 | -3.12 | C | Y | ||
| YJR015W c | -2.92 | C | |||
| CYC1 | -2.80 | C | Y | Y | |
| YPR172W | -2.79 | C | Y | ||
| TPO2 | -2.70 | C | Y | ||
| HSP30 | -2.51 | C | Y | ||
| FMP48 | -2.42 | C | |||
| TPO1 | -2.36 | T | Y d | Y d | |
| STP4 | -2.22 | T | Y | ||
| UNG1 | -2.20 | C | Y | ||
| PTC2 | -2.18 | T | Y | ||
| ADE17 | -2.18 | C | Y | ||
| ISF1 | -2.16 | T | Yc | ||
| HXT4 | -2.16 | T | Y | ||
| FMP12 | -2.15 | T | Y | ||
| EFM3 | -2.11 | T | Y | ||
| FMP41 | -2.09 | T | Y d | ||
| GSY1 | -2.09 | T | Y | ||
| SIA1 | -2.08 | C | Y | ||
| TPO4 | -2.07 | C | |||
| SCS7 | -2.06 | T | Y | Y d | |
| MIG3 | -2.04 | T | Y | ||
| WSC4 | -2.02 | T | Y | ||
| PTI1 | -1.94 | T | Y | ||
| HOR2 | -1.92 | T | Y | ||
| IML3 | -1.90 | C | Y | Y d | |
| POA1 | -1.89 | C | Y | Y d |
a Expression determined as Log2 fold change in mutant relative to WT
b Orientation determined with respect to 3' end of listed gene; C = convergent, T = tandem
c No RT observed at this gene but two previous genes down-regulated indicating local transcription changes
d Readthrough phenotype subtle