Table 3. rs75548401 and multiple SNPs at the MAPT locus relate to age at onset.
The age at onset of Parkinson disease motor symptoms was significantly associated with rs75548401 and with multiple SNPs at the MAPT locus. A positive test statistic indicates that the minor allele related to younger age at onset; a negative test statistic indicates that the minor allele related to older age at onset.
SNP | Chr | Nearest Gene(s) | Test Statistic | Standard Error | p value |
---|---|---|---|---|---|
rs76763715 | 1 | GBA (N370S) | 2.646 | 3.284 | 0.420 |
rs75548401 | 1 | GBA (K26R) | 9.185 | 3.681 | 0.013 |
rs10928513 | 2 | ACMSD/TMEM163 | −4.540 | 18.923 | 0.810 |
rs6723108 | 2 | ACMSD/TMEM163 | −1.750 | 18.982 | 0.927 |
rs2390669 | 2 | STK39 | −3.667 | 13.287 | 0.783 |
rs11711441 | 3 | MCCC1/LAMP3 | −1.732 | 11.974 | 0.885 |
rs6599388 | 4 | GAK/TMEM175 | 22.040 | 19.211 | 0.251 |
rs356219 | 4 | SNCA | −0.537 | 17.916 | 0.976 |
rs11931074 | 4 | SNCA | 4.383 | 10.994 | 0.690 |
rs356220 | 4 | SNCA | 4.954 | 18.120 | 0.785 |
rs356165 | 4 | SNCA | 6.199 | 17.714 | 0.726 |
rs3822086 | 4 | SNCA | 3.757 | 10.984 | 0.732 |
rs3857059 | 4 | SNCA | 3.757 | 10.984 | 0.732 |
rs2736990 | 4 | SNCA | −4.456 | 18.863 | 0.813 |
rs2942168 | 17 | CRHR1/MAPT | −38.813 | 15.662 | 0.013 |
rs393152 | 17 | CRHR1/MAPT | −35.708 | 15.692 | 0.023 |
rs7215239 | 17 | CRHR1/MAPT | −28.984 | 15.795 | 0.067 |
rs1981997 | 17 | MAPT | −38.052 | 15.650 | 0.015 |
rs1052553 | 17 | MAPT | −38.849 | 15.655 | 0.013 |
rs17652121 | 17 | MAPT | −38.052 | 15.650 | 0.015 |
rs8070723 | 17 | MAPT | −39.225 | 15.659 | 0.012 |
rs199533 | 17 | NSF/MAPT | −31.585 | 14.611 | 0.031 |