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. 2015 Dec 22;47:97. doi: 10.1186/s12711-015-0175-8

Table 2.

Correlations between genomic estimated breeding values based on observed and imputed genotypes with different accuracies for post weaning weight

Genotypes Observed 50k Imputed 50k − 1 Imputed 50k − 2 Imputed 50k − 3 Imputed 50k − 4 Observed 12k
Observed 50k 1.000
Imputed 50k − 1 0.991 1.000
Imputed 50k − 2 0.970 0.968 1.000
Imputed 50k − 3 0.957 0.953 0.957 1.000
Imputed 50k − 4 0.814 0.812 0.821 0.819 1.000
Observed 12k 0.915 0.911 0.926 0.916 0.869 1.000

50k − 1: imputation accuracy between 0.88 and 0.99

50k − 2: imputation accuracy between 0.73 and 0.96

50k − 3: imputation accuracy between 0.62 and 0.86

50k − 4: imputation accuracy between 0.55 and 0.60