Table 2.
Correlations between genomic estimated breeding values based on observed and imputed genotypes with different accuracies for post weaning weight
| Genotypes | Observed 50k | Imputed 50k − 1 | Imputed 50k − 2 | Imputed 50k − 3 | Imputed 50k − 4 | Observed 12k |
|---|---|---|---|---|---|---|
| Observed 50k | 1.000 | |||||
| Imputed 50k − 1 | 0.991 | 1.000 | ||||
| Imputed 50k − 2 | 0.970 | 0.968 | 1.000 | |||
| Imputed 50k − 3 | 0.957 | 0.953 | 0.957 | 1.000 | ||
| Imputed 50k − 4 | 0.814 | 0.812 | 0.821 | 0.819 | 1.000 | |
| Observed 12k | 0.915 | 0.911 | 0.926 | 0.916 | 0.869 | 1.000 |
50k − 1: imputation accuracy between 0.88 and 0.99
50k − 2: imputation accuracy between 0.73 and 0.96
50k − 3: imputation accuracy between 0.62 and 0.86
50k − 4: imputation accuracy between 0.55 and 0.60