Table 2. Assemblies of transcriptomes, ORF predictions and functional annotations for interspecific comparisons and Gene Ontology analyses.
Species | R. flavipes | R. grassei | R. lucifugus |
---|---|---|---|
No of contigs | 93,420 | 111,549 | 91,280 |
N50 | 998 | 1,041 | 1,067 |
No. of predicted ORF | 64,342 | 79,640 | 65,855 |
Non-redundant ORF | 64,328 | 79,404 | 65,814 |
No of ORF with BLASTp hit | 19,375 (30.1%) | 21,671 (27.3%) | 20,377 (31%) |
No of annotated ORF (GO term) | 5,389 (8.4%) | 4,922 (6.2%) | 5,214 (7.9%) |