. 2015 Dec 23;10(12):e0145665. doi: 10.1371/journal.pone.0145665

Table 5. Putative candidate gene-based markers located on major QTL regions for PMR and FS.

Trait	Gene ID	Marker type ^a	Primer sequence (5’– 3’)	SNP location [Chr.(bp)]	Enzyme	Product size (bp) ^b
Trait	Gene ID	Marker type ^a	Primer sequence (5’– 3’)	SNP location [Chr.(bp)]	Enzyme	AM	TS
PMR	Cla019831	CAPS	`F:CTTTTGCTTGCATTGTGCAT`	2(26751854)	TaqI	527	334,223
			`R:GGATGCAAAGGAGCTGTTTC`
	Cla019844	dCAPS	`F:ATTGAAGACCGTCCTGCCTTTCTCATAAAAAGT`	2(26586794)	MseI	160	192
			`R:GCGCAGCCAAATAATTCAGT`
FSI	Cla011257	dCAPS	`F:CCTATTTCACCAAACTCTCTCG`	3(26846820)	EcoRI	345	373
			`R:TCCACTAAGACTACTTCTCGATTCCATGAAT`

^aCAPS, cleaved amplified polymorphic sequence; and dCAPS, derived-cleaved amplified polymorphic sequence

^bAM, ‘Arka Manik’; and TS, ‘TS34’