Table 2. Taenia solium genomes assemblies’ statistics.
CDC | NIH | Hybrid | Hybrid | |
---|---|---|---|---|
Puno proglottid | Huancayo Cyst | Cyst/proglottid (all contigs) | Cyst/proglottid (GenBank)† | |
Total sequenced bases | 109,898,809 | 114,605,177 | 116,668,703 | 111,029,218 |
Contigs | 47,475 | 18,361 | 19,727 | 7,979 |
GC% | 42.96 | 42.83 | 42.86 | 42.80 |
N50 | 4,839 | 39,744 | 46,836 | 43,923 |
Shortest contig (nt) | 287 | 51 | 51 | 1000 |
Largest contig (nt) | 79,438 | 307,365 | 395,362 | 39,5362 |
Mean contig length | 2,314.9 | 6,241.8 | 5,914.2 | 13,915.2 |
Statistics of the hybrid genome are shown for the full version and for the set of contigs uploaded to GenBank
†Only contigs larger than 1000bp were submitted