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. 2015 Dec 24;4:64. doi: 10.1186/s13742-015-0103-4

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© Liu et al. 2016

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — The AsmVar approach. Discovery, genotyping and characterization of structural variants and novel sequences from the de novo genome assemblies on a population scale. Panels a - g represent different modules. See the main text for a detailed methodological description for each module. See also Additional file 1 for the Glossary. NAHR, non-allelic homologous recombination; NHR, non-homologous recombination; TEI, transposable element insertion; VNTR, variable number of tandem repeats