Table 4.
Chr | SNP | bp | band | 67 LOAD fams | 215 LOAD fams | 282 LOAD fams | |||
---|---|---|---|---|---|---|---|---|---|
Pjoint | Pjoint | Pjoint | |||||||
Dom | Rec | Dom | Rec | Dom | Rec | ||||
2 | rs4665809 | 26,251,361 | 2p23.3 | 1.2 × 10−4 | 0.001 | 0.474 | 0.420 | 2.8 x10−4 | 0.001 |
2 | rs10173959 | 31,028,945 | 2p23.1 | 5.9 × 10−5 | 0.005 | 0.998 | 0.881 | 0.001 | 0.013 |
2 | rs2071048 | 138,721,597 | 2q22.1 | 1.7 × 10−4 | 0.151 | 0.126 | 0.111 | 0.003 | 0.039 |
3 | rs1709965 | 106,659,501 | 3q13.12 | 2.9 × 10−5 | 0.003 | 0.924 | 0.326 | 0.005 | 0.027 |
3 | rs6438213 | 114,329,961 | 3q13.31 | 7.0 × 10−6 | 3.7 × 10−5 | 0.759 | 0.779 | 2.7 x10−4 | 0.002 |
5 | rs7700370 | 33,702,830 | 5p13.3 | 0.001 | 0.033 | 0.695 | 0.596 | 0.014 | 0.042 |
6 | rs9390610 | 149,113,186 | 6q25.1 | 4.4 × 10−4 | 0.032 | 0.818 | 0.190 | 0.149 | 0.055 |
6 | rs9390611 | 149,114,811 | 6q25.1 | 0.001 | 0.001 | 0.650 | 0.719 | 0.019 | 0.022 |
6 | rs11966489 | 157,414,029 | 6q25.3 | 1.5 × 10−4 | 0.001 | 0.358 | 0.364 | 0.009 | 0.043 |
7 | rs2240401 | 30,673,345 | 7p14.3 | 7.0 × 10−5 | 4.3 × 10−4 | 0.096 | 0.049 | 2.8 ×10−5 | 7.4 ×10−5 |
7 | rs10255835 | 31,044,646 | 7p14.3 | 3.0 × 10−5 | 5.0 × 10−6 | 0.189 | 0.239 | 3 ×10−5 | 1.2 ×10−5 |
7 | rs218097 | 31,497,237 | 7p14.3 | 0.001 | 0.016 | 0.885 | 0.804 | 0.016 | 0.095 |
7 | rs6651030 | 156,876,217 | 7q36.3 | 2.0 x10−4 | 0.013 | 0.559 | 0.680 | 0.013 | 0.037 |
9 | rs3739553 | 129,984,107 | 9q33.3 | 4.9 × 10−4 | 0.005 | 0.359 | 0.584 | 0.005 | 0.034 |
10 | rs12360009 | 14,333,240 | 10p13 | 3.1 × 10−4 | 0.001 | 0.151 | 0.222 | 7.9 x10−5 | 3.4 ×10−4 |
11 | rs2232932 | 61,957,137 | 11q12.3 | 3.1 × 10−5 | 1.9 × 10−4 | 0.046 | 0.060 | 6.6 x10−6 | 3.9 ×10−5 |
Pjoint correspond to the P-value of the joint linkage and association analysis. Regions with significant SNPs after Bonferroni’s adjustment (P ≤ 0.003) under both models are shown in bold and italics.