Figure 3.
Comparison of the fold-change (fc) values obtained using the LymPHOS tools with those using the Dante package (18). For Dante analysis, each reporter ion had its values normalized against the median of non-phosphorylated peptide intensities. n = 1562 for each time point, Coefficients of correlation r = 0.98 (15 min) and r = 1 (120 min).