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. Author manuscript; available in PMC: 2015 Dec 28.
Published in final edited form as: J Chem Theory Comput. 2008 Dec 9;4(12):2160–2169. doi: 10.1021/ct800196k

Table 9.

Effects of VDW scaling. Tests were done on the Xiang protein set using the 1.0Ǻ rotamer library.

VDW Radii Scaling RMSD (Ǻ)
75% 0.959
80% 0.884
85% 0.866
90% 0.896
95% 0.956
100% 1.036