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. 2015 Oct 23;290(52):30783–30796. doi: 10.1074/jbc.M115.691907

TABLE 1.

Strains and plasmid construction

Strain or plasmid Genetic description Source
E. coli strains
    DH5α F- Φ80lacZΔM15Δ (lacZYA-argF) U169 recA1 Invitrogen
    BL21(DE3) ΔompT gal dcm lon hsdSB (rB mB)λ (DE3) (50)
    A38a C600 lepB (N274K) (5)
    AD202 ompT1000::kan, KmR (51)

Plasmids
    E. coli
        pLEPB1-wt pET23 (tag-His6)lepB, AmpR (32)
        pLEPB(N274K) pET23 (tag-His6)lepB (N274K), AmpR (9)
        pLEPB1-mutb pET23 (tag-His6)lepB(mutb), AmpR This work
        pColD1c pUC18 cda-cdi-cdl, (EcoRI and BamHI), AmpR (52)
        pColDIc pET11a cda-cdi(tag-His6), (NdeI/BamHI), AmpR (9)
        pColDI-mutc,d pET11a cda(mutd)-cdi(tag-His6), (NdeI/BamHI), AmpR This work
        pColDI(H611A)c pET11a cda-cdi(H611A; tag-His6), (NdeI/BamHI), AmpR This work
        pColD-CD(Glu-314--Met-590) pET11a cda (tag-H6)Glu-314--Met-590, (NdeI/BamHI), AmpR (9)
        pColD-A(Glu-314--Leu-697) pET11a cda(Glu-314--Leu-697)-cdi(tag-His6), (NdeI/BamHI), AmpR This work
        pColD-B(Met-1--Met-590) pET11a cda (tag-His6)Met-1--Met-590, (NdeI/BamHI), AmpR This work
        pColD-E(Met-1--Met-590) pACYC-Duet1 cda Met-1--Met-590, (NdeI/BglII), CmR This work
        pColD-Del(1–14) pET11c truncated cda(tag-His6), (NdeI/BamHI), AmpR This work

    K. pneumoniae
        pMC04-KlebC2e pBSK+ kcp-kca-kci (BamHI), AmpR (31)
        pKlebCI pACYC-Duet1 kca-kci(tag-His6), (NdeI/BglII), CmR This work

    K. oxytoca
        pKlebDf pBSK+ kdp-kda-kdi, (EcoRI), AmpR (31)

a Strain sensitive to pore-forming colicin B but resistant to tRNase colicin D.

b Mutations in LepB: N274A, N274D, N277A, N277K, G272A, or A279G.

c cda and cdi are genes encoding colicin D and its immunity protein; cdl encodes the bacteriocin-release protein.

d Mutations in colicin D: G413A, A422D, A422V, G423D, S426A, P430A, G431D, G431A, R432A.

e kca and kci are genes encoding klebicin C and its immunity protein; kcp and kdp are genes for phage tail fiber-like proteins in Klebsiella strains.

f kda and kdi are genes encoding klebicin D and its immunity protein.