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. 2015 Nov 2;290(52):31013–31024. doi: 10.1074/jbc.M115.677534

TABLE 1.

Primers and their sequences used to clone the truncated 5′ regions of Ogt and Mgea5 promoters, ChIP assay, and quantitative PCR analysis

Primers Sequences
Cloning primers
    OGT-TPF1 (−1419 to +233 bp) 5′-ACGCACTAATCAAGAAGGCC-3′
    OGT-TPF2 (−698 to +233 bp) 5′-GAGGAAAAAGGCATCCTCTT-3′
    OGT-TPF3 (−294 to +233 bp) 5′-CGTACTTTAGCGCTTGCCAA-3′
    OGT-TPF4 (−178 to +233 bp) 5′-GAGCCCTTAACCCGGAGTT-3′
    OGT-TPF5 (−105 to +233 bp) 5′-CTTGGGCGGAAGGTTACGTA-3′
    OGT-TPF6 (−66 to +233 bp) 5′-ACAGTCACTTGGTCGGTAGT-3′
    OGT-TPR 5′-GGAGCTTCTTGAGATAGAAC-3′
    MGEA5-TPF1 (−1034 to +181 bp) 5′-CCCTTACGCACACCGCACACTC-3′
    MGEA5-TPF2 (−582 to +181 bp) 5′-AGAAGTATCGTCCCGGCGCCT-3′
    MGEA5-TPF3 (−407 to +181 bp) 5′-AATGGTACGTCCCACCGCCG-3′
    MGEA5-TPF4 (−48 to +181 bp) 5′-AGGCAGCGGCTGACAAA-3′
    MGEA5-TPR 5′-TGGCTCTCCTTCTGCACCAT-3′

ChIP primers
    mmuOGT-CP-F 5′-CGGTAGTCTTGTTACGCGCT-3′
    mmuOGT-CP-R 5′-TCTACTGCCGCCACTACTGA-3′
    mmuOGA-CP-F 5′-AAAATGGTACGTCCCACCG-3′
    mmuOGA-CP-R 5′-GCTTCCTGTTTATCCGCACT-3′
    huOGT-CP-F 5′-AAAACGTATCCGTCCCGTGT-3′
    huOGT-CP-R 5′-TGTTACAATCAAGTGCCCGC-3′
    huMGEA5-CP-F 5′-GTAATGGTCCGTCCGTCCC-3′
    huMGEA5-CP-R 5′-CGCTTCCTGTTTATCCGCACT-3′

qPCR primers
    OGT-F 5′-CCTGGGTCGCTTGGAAGA-3′
    OGT-R 5′-TGGTTGCGTCTCAATTGCTTT-3′
    MGEA5-F 5′-CAAGTTGCACACAGTGGAGCTAA-3′
    MGEA5-R 5′-AAAGAGGGTGCAGCAACTAAGG-3′
    18S-F 5′-CGAACGTCTGCCCTATCAACTT-3′
    18S-R 5′-ACCCGTGGTCACCATGGT-3′