Table 13. Support for or against de novo and reference-based sequences of each museum specimen forming a clade.
| Taxon | Sample | 7 Genes | 18S | 28S | COI | ArgK | CAD | Topo | wg |
|---|---|---|---|---|---|---|---|---|---|
| Bembidion subfusum | 3977 | 100 | 100 | 92 | 100 | 83 | 98 | 100 | 89 |
| Bembidion sp. nr. transversale | 3021 | 100 | -53/- | -87/94 | 85 | - | -/69 | 82 | |
| Lionepha chintimini | 4002 | 84 | -100 | -86/64 | -99/91 | 95 | 61 | 58 | 83 |
| Bembidion lachnophoroides | 3022 | 100 | 99 | 100 | 99 | 100 | 99 | 100 | 92 |
| Bembidarenas | 3983 | -82/100 | -100/100 | -100/100 | 98 | -56/100 | -79/100 | -94/69 | |
| Bembidion orion | 2831 | 92 | -99/100 | -96/100 | 62 | -/69 | -65/100 | -99/98 | -56/94 |
| Bembidion "Inuvik" | 3285 | -59/100 | -98/100 | -97/96 | -83/100 | -98/74 | -/69 | -69/95 | -88/96 |
| Bembidion lapponicum | 3974 | 100 | - | 61 | 99 | 89 | 72 | -76/100 | -66/97 |
| Bembidion "Arica" | 3242 | 100 | 98 | 100 | 100 | 100 | 100 | 100 | 100 |
| Bembidion cf. "Desert Spotted" | 3978 | 78 | 59 | -73/74 | -96/100 | -51 | 53 | 58 | -/57 |
| Bembidion musae | 3239 | 100 | 100 | 100 | 100 | 99 | 100 | 94 | 96 |
| Bembidion "Inuvik" | 3984 | -59/100 | -98/100 | -97/96 | -83/100 | -98/74 | -/69 | -69/95 | -88/96 |
| Bembidion orion | 3079 | -60/100 | -99/100 | -96/100 | - | 56 | -60/100 | -99/98 | -56/94 |
| Bembidion sp. nr. transversale | 3205 | 91 | -53/- | -87/94 | 69 | -51 | -/69 | - | 65 |
Bootstrap support for phylogenetic placement of museum specimen sequences in concatenated (7 Genes) and single gene analyses matrices with DeNovo, NearRef, and FarRef sequences. Single positive numbers indicate that there is that amount of maximum-likelihood bootstrap support for the far reference, near reference, and de novo sequence (if present) forming a clade exclusive of all other sequences. Cells with two numbers separated by a slash show, first, bootstrap support against the three sequences for each specimen forming a clade, and second, the bootstrap support for the three sequences forming a clade with members of the prediction group. Single negative numbers indicate bootstrap support against the three sequences forming a clade and support against them all being in the predicted group. Blank cells indicate that the sequence was not recovered by at least one assembly method; cells with only “-”indicate that the relationships of the three sequences were unresolved in the 50% majority rule bootstrap tree.