Table 1. Phylum, family and phylogenetic cluster of the bacteria used.
Bacterial strain | Phylum | Family | Phylogenetic cluster | Ref. |
---|---|---|---|---|
F. prausnitzii A2-165 | Firmicutes | Ruminococcaceae | Clostr. cluster IV | 12 |
F. prausnitzii M21/2 | Firmicutes | Ruminococcaceae | Clostr. cluster IV | 34 |
F. prausnitzii S3L/3 | Firmicutes | Ruminococcaceae | Clostr. cluster IV | 34 |
F. prausnitzii L2-6 | Firmicutes | Ruminococcaceae | Clostr. cluster IV | 12 |
F. prausnitzii HTF-F | Firmicutes | Ruminococcaceae | Clostr. cluster IV | 2 |
R. bromii L2-63 | Firmicutes | Ruminococcaceae | Clostr. cluster IV | 13 |
E. rectale A1-86 | Firmicutes | Lachnospiraceae | Clostr. cluster XIVa | 13 |
E. hallii L2-7 | Firmicutes | Lachnospiraceae | Clostr. cluster XIVa | 35 |
B. adolescentis L2-32 | Actinobacteria | Bifidobacteriaceae | 13 | |
Megamonas sp. Mag1B 95,0% homology* with M. rupellensis | Firmicutes | Veillonellaceae | This work | |
Clostridium sp. 82B 95,4% homology* with C. hathewayi | Firmicutes | Clostridiaceae | Clostr. cluster XIVa | This work |
Clostridium sp. Lac1D 90,5% homology* with C. xylanovorans | Firmicutes | Clostridiaceae | Clostr. cluster XIVa | This work |
L. plantarum WCFS1 | Firmicutes | Lactobacillaceae |
(Clostr, Clostridium); *based on the sequence homology of 850 nucleotides of the 16S rRNA.