Table 3.
Genes differentially expressed under S deficiency (Maruyama-Nakashita et al., 2006) and under different mitochondrial impairments.
| Accession | Description | Mitochondrial dysfunctions | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| complex I | complex III | AOX | ATP synthase | MnSOD | MGR | |||||||
| −S | ROT | ndufs4 | ndufs1 | OLM | prxIIF + AA | aox1a | AP9:u-ATP9 | AP3:u-ATP9 | msd1-RNAi | msh1-recA | ||
| at5g23050 | AAE17 (ACYL-ACTIVATING ENZYME 17 | |||||||||||
| at1g12200 | Flavin-containing monooxygenase family protein| | |||||||||||
| at3g05400 | Sugar transporter, putative | |||||||||||
| at1g08920 | Sugar transporter, putative | |||||||||||
| at2g22330 | CYP79B3; electron carrier/heme binding/iron ion binding | |||||||||||
| at1g78000 | SULTR1;2 (SULFATE TRANSPORTER 1;2 | |||||||||||
| at3g15990 | SULTR3;4 (SULFATE TRANSPORTER 3;4) | |||||||||||
| at1g36370 | SHM7 (serine hydroxymethyltransferase 7) | |||||||||||
| at2g44460 | BGLU28 (BETA GLUCOSIDASE 28) | |||||||||||
| at5g40670 | PQ-loop repeat family protein/transmembrane family protein | |||||||||||
| at3g49580 | LSU1 (RESPONSE TO LOW SULFUR 1) | |||||||||||
| at5g26220 | ChaC-like family protein | |||||||||||
| at5g48180 | NSP5 (NITRILE SPECIFIER PROTEIN 5) | |||||||||||
| at3g47960 | Proton-dependent oligopeptide transport (POT) family protein | |||||||||||
| at1g64170 | ATCHX16 (CATION/H+ EXCHANGER 16 | |||||||||||
| at5g48850 | ATSDI1 (SULFUR DEFICIENCY-INDUCED 1) | |||||||||||
| at3g12520 | SULTR4;2; sulfate transmembrane transporter | |||||||||||
| at1g04770 | Male sterility MS5 family protein | |||||||||||
| at1g75280 | Isoflavone reductase, putative | |||||||||||
| at4g13430 | IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1) | |||||||||||
| at3g56040 | UGP3 (UDP-GLUCOSE PYROPHOSPHORYLASE 3) | |||||||||||
| at5g37980 | NADP-dependent oxidoreductase, putative | |||||||||||
| at1g78370 | ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20); | |||||||||||
| at5g43780 | APS4; sulfate adenylyltransferase (ATP) | |||||||||||
| at4g25100 | FSD1 (Fe SUPEROXIDE DISMUTASE 1) | |||||||||||
| at4g39950 | CYP79B2; electron carrier/heme binding/iron ion binding monooxygenase/oxygen binding | |||||||||||
| at5g23020 | IMS2 (2-ISOPROPYLMALATE SYNTHASE 2) | |||||||||||
| at4g01430 | Nodulin MtN21 family protein | |||||||||||
| at4g31500 | CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1) | |||||||||||
| at5g23010 | MAM1 (METHYLTHIOALKYLMALATE SYNTHASE 1 | |||||||||||
The data sets from plants genetically impaired in their mitochondrial function corresponded to the following genetic backgrounds: aox1a, (loss of alternative oxidase); ndufs4 and ndufa1 (loss of complex I); msh1xrecA, (mitochondrial genome rearrangement, MGR); AP3:u-ATP9 and AP9:u-ATP9 (loss of mitochondrial ATP synthase); msd1-RNAi (loss of mitochondrial manganese superoxide dismutase, MSD1, protein) and prxII F (inhibition of complex III) (Curley et al., 2009). The data sets from plants having their mitochondrial respiratory chain inhibited by the following chemical treatments: olygomicyn A (OLM) and rotenone (ROT) (Bales and Perkeybile, 2012), and Antimycin A (AA) (Curley et al., 2009). Up-regulated genes are in green and down-regulated genes are in red.