Table 3.
Samples Used for Maximum Likelihood Phylogenetic Analyses and Respective GenBank Accession Numbers for the 18S rRNA Sequences
| Isolatea | Host | Locality | 18S rRNA | |
|---|---|---|---|---|
| Lineage A | ||||
| San Augustin | Human | Homo sapiens | Colombia | AJ012417 |
| Macias | Human | Homo sapiens | Colombia | AJ012415 |
| H8GS | Human | Homo sapiens | Honduras | AY491744 |
| SMH-03 | Human | Homo sapiens | Guatemala | AY491739 |
| SMH-79 | Human | Homo sapiens | Guatemala | AY491740 |
| MHOM/VE/99/CH-99 | Human | Homo sapiens | Venezuela (Barinas) | AY491742 |
| TryCC_533; MAN/VE/00/LOBITA | Dog | Canis familiaris | Venezuela (Barinas) | EF071572 |
| 220; AT-AEI | Monkey | Saimiri sciureus | Brazil (PA) Marajó | AY491747 |
| 202; AT-ADS | Monkey | Saimiri sciureus | Brazil (PA) Marajó | AY491746 |
| 353; Maloch-05 | Monkey | Callicebus m. cupreus | Brazil (AC) P. de Castro | AY491750 |
| 369; ROma 01 | Opossum | Didelphis marsupialis | Brazil (RO) Monte Negro | AY491748 |
| 382; ROma 06 | Opossum | Didelphis marsupialis | Brazil (RO) Monte Negro | AY491749 |
| P19 | Opossum | Didelphis marsupialis | Brazil (MG) Uberaba | EF071573 |
| P21 | Opossum | Didelphis marsupialis | Brazil (MG) Uberaba | EF071574 |
| Choachi | Triatomine | Rhodnius prolixus | Venezuela | AJ012414 |
| Palma-2 | Triatomine | Rhodnius prolixus | Venezuela | AY491741 |
| TryCC_775; VE/9 | Triatomine | Rhodnius prolixus | Venezuela (Barinas) | EF071575 |
| TryCC_795; VE/3 | Triatomine | Rhodnius robustus I | Venezuela (Trujillo) | EF071576 |
| TryCC_677; ROR-20 | Triatomine | Rhodnius robustus II | Brazil (RO) Monte Negro | EF071577 |
| TryCC_701; ROR-62 | Triatomine | Rhodnius robustus II | Brazil (RO) Monte Negro | EF071578 |
| TryCC_704; ROR-85 | Triatomine | Rhodnius robustus II | Brazil (RO) Monte Negro | EF071579 |
| Lineage B | ||||
| AM80 | Human | Homo sapiens | Brazil (AM) Rio Negro | AY491766 |
| AM11 | Human | Homo sapiens | Brazil (AM) Rio Negro | AY491758 |
| 207; AE-AAA | Monkey | Cebuella pygmaea | Brazil (AC) Rio Branco | AY491752 |
| 194; AE-AAB | Monkey | Cebuella pygmaea | Brazil (AC) Rio Branco | AY491753 |
| 233; 4–30 | Monkey | Saguinus l. labiatus | Brazil (AC) Rio Branco | AY491756 |
| 238; 5–31 | Monkey | Saguinus l. labiatus | Brazil (AC) Rio Branco | AY491754 |
| 236; 8–34 | Monkey | Saguinus f. weddelli | Brazil (AC) Rio Branco | AY491755 |
| 205; M-12229 | Monkey | Aotus sp. | Brazil (AM) Manaus | AY491757 |
| 416; 2495 | Monkey | Alouatta stramineus | Brazil (AM) Rio Negro | AY491760 |
| 427; 2570 | Monkey | Callicebus lugens | Brazil (AM) Rio Negro | AY491751 |
| Saimiri | Monkey | Saimiri sciureus | Brazil (AM) Manaus | AY491768 |
| Preguici | Sloth | Choloepus didactylus | Brazil (PA) Belém | AY491767 |
| Legeri_10 | Anteater | Tamandua tetradactyla | Brazil (PA) Belém | AY491769 |
| Legeri_32 | Anteater | Tamandua tetradactyla | Brazil (PA) Belém | AY491759 |
| 4176 | Triatomine | Rhodnius brethesi | Brazil (AM) Rio Negro | EF071580 |
| Lineage C | ||||
| PG | Human | Homo sapiens | Panama | AJ012416 |
| 1625 | Human | Homo sapiens | El Salvador | AY491738 |
| T. leeuwenhoeki | Sloth | Choloepus didactylus | Panama | AJ012412 |
| RGB | Dog | Canis familiaris | Colombia | AJ009160 |
| SO29 | Triatomine | Rhodnius pallescens | Colombia (Sucre) | EF071581 |
| G5 | Triatomine | Rhodnius pallescens | Colombia (Sucre) | EF071582 |
| TCE_694ci | Triatomine | Panstrongylus chinai | Ecuador (Coamine, Paltas) Loja | |
| TJQ_941ci | Triatomine | Triatoma carrioni | Ecuador (Jacapo, Quilanga) Loja | |
| TCQ_991ci | Triatomine | Rhodnius ecuadoriensis | Ecuador (Chaquizhca, Calvas) Loja | |
| MBJ_1411s | Opossum | Didelphis marsupialis | Ecuador (El Bejuco, Portoviejo) Manabi | |
| MCQ_1483k | Rodent | Rhipidomys spp. | Ecuador (Chaquizhca, Calvas) Loja | |
| MCQ_1487k | Rodent | Sciurus stramineus | Ecuador (Chaquizhca, Calvas) Loja | |
| MCQ_1516k | Opossum | Didelphis marsupialis | Ecuador (Chaquizhca, Calvas) Loja | |
| TBJ_1540ci | Triatomine | Panstrongylus howardi | Ecuador (El Bejuco, Portoviejo) Manabi | |
| TTO_2151ci | Triatomine | Rhodnius ecuadoriensis | Ecuador (Tablada del Algodón, Junin) Manabi | |
| TBJ_2239k | Triatomine | Rhodnius ecuadoriensis | Ecuador (El Bejuco, Portoviejo) Manabi | |
| TBJ_2268ci | Triatomine | Rhodnius ecuadoriensis | Ecuador (El Bejuco, Portoviejo) Manabi | |
| TCI_2307ci | Triatomine | Rhodnius ecuadoriensis | Ecuador (Chita, San Vicente) Manabi | |
| TLG_2345k | Triatomine | Rhodnius ecuadoriensis | Ecuador (Liguiqui, Manta) Manabi | |
| TET_2388k | Triatomine | Panstrongylus rufotuberculatus | Ecuador (Estero Seco, Jama) Manabi | |
| TGA_2552ci | Triatomine | Rhodnius ecuadoriensis | Ecuador (Guara, Calvas) Loja | |
| TCQ_2915k | Triatomine | Rhodnius ecuadoriensis | Ecuador (Chaquizhca, Calvas) Loja | |
| TCQ_3086k | Triatomine | Rhodnius ecuadoriensis | Ecuador (Chaquizhca, Calvas) Loja | |
| Lineage D | ||||
| SC58 | Rodent | Echimys dasythrix | Brazil (SC) | AY491745 |
| Lineage E | ||||
| TryCC_643; Tra643 | Bat | Platyrrhinus lineatus | Brazil (MS) Miranda | EU867803 |
| Outgroups | ||||
| Trypanosoma sp. | Bat | Rousettus aegyptiacus | Gabon | AJ012418 |
| 1_EA_2008; Trypanosoma sp. | Civet | Nandinia binotata | Cameroon | FM202492 |
| P14; Trypanosoma vespertilionis | Bat | Pipistrellus pipistrellus | England | AJ009166 |
| 2_EA_2008; Trypanosoma sp. | Monkey | Cercopithecus nictitans | Cameroon | FM202493 |
| USP; Trypanosoma conorhini | Rodent | Rattus rattus | Brazil | AJ012411 |
a
Samples in bold indicate the sequences newly generated for this study.