Table 1.
QTL sets for which p was <0.1 (in bold) for any of the three phenotypes
| QTL set | nrSNP | LMP | ADG | FE |
|---|---|---|---|---|
| Leukocyte quantity | 314 | 0.0011 | 0.2387 | 0.0919 |
| Cannon bone circumference | 76 | 0.0024 | 0.8714 | 0.0995 |
| Head mass | 259 | 0.0025 | 0.5209 | 0.4896 |
| Testes mass | 36 | 0.0041 | 0.3605 | 0.8389 |
| White adipose amount | 31 | 0.0088 | 0.0389 | 0.1443 |
| Total foot mass | 22 | 0.0186 | 0.7994 | 0.3193 |
| CD4-positive T cell quantity | 3 | 0.0278 | 0.6724 | 0.1976 |
| Blood acidity-alkalinity balance trait | 47 | 0.0308 | 0.1103 | 0.9526 |
| White adipocyte size trait | 284 | 0.0346 | 0.8514 | 0.9304 |
| Outer ear area | 62 | 0.0421 | 0.4305 | 0.1122 |
| Longissimus dorsi muscle thickness | 120 | 0.0446 | 0.9997 | 0.1073 |
| Type IIa muscle fibre quantity | 92 | 0.0519 | 0.4368 | 0.9979 |
| Nipple quantity | 622 | 0.0542 | 0.1287 | 0.8911 |
| Sperm quantity | 23 | 0.0702 | 0.8426 | 0.8555 |
| Skeletal muscle fibre quantity | 51 | 0.0732 | 0.6365 | 0.1617 |
| Type IIb muscle fibre quantity | 147 | 0.0739 | 0.5245 | 0.4762 |
| Blood interleukin-10 amount | 60 | 0.0797 | 0.1755 | 0.3106 |
| Vertebra quantity | 103 | 0.0819 | 0.6869 | 0.5845 |
| Thoracic vertebra quantity | 52 | 0.0890 | 0.1276 | 0.9734 |
| Blood haemoglobin amount | 230 | 0.0985 | 0.7056 | 0.6039 |
| Bone mineral mass | 31 | 0.1462 | 0.0563 | 0.9503 |
| Sperm morphology trait | 24 | 0.1523 | 0.0235 | 0.7538 |
| Blood LDL cholesterol amount | 70 | 0.1594 | 0.0078 | 0.2317 |
| Locomotor activity trait | 24 | 0.2583 | 0.0661 | 0.1148 |
| Sperm motility trait | 27 | 0.2895 | 0.0384 | 0.5715 |
| Muscle water amount | 321 | 0.3356 | 0.0366 | 0.5561 |
| Lung mass | 15 | 0.3399 | 0.4898 | 0.0422 |
| Blood bilirubin amount | 16 | 0.3609 | 0.0561 | 0.0868 |
| Erythrocyte size trait | 348 | 0.3836 | 0.0617 | 0.6727 |
| Glycolytic potential | 129 | 0.3889 | 0.2145 | 0.0438 |
| Limb conformation trait | 11 | 0.4034 | 0.9988 | 0.0005 |
| Blood sodium amount | 34 | 0.4449 | 0.0465 | 0.9931 |
| Blood adrenocorticotropin amount | 20 | 0.4575 | 0.0563 | 0.1920 |
| Ejaculation trait | 25 | 0.5113 | 0.4116 | 0.0035 |
| Hindlimb muscle mass | 94 | 0.5439 | 0.7693 | 0.0248 |
| White adipose mass | 110 | 0.5492 | 0.0241 | 0.6643 |
| Femur mineral mass | 20 | 0.6386 | 0.0449 | 0.1339 |
| Skeletal muscle fibre size trait | 252 | 0.6731 | 0.8899 | 0.0847 |
| Anus morphology trait | 141 | 0.7901 | 0.0541 | 0.9144 |
| Rump morphology trait | 101 | 0.8217 | 0.8194 | 0.0709 |
| Skeletal muscle myosin isoform amount | 9 | 0.8224 | 0.0919 | 0.5332 |
| Blood leptin amount | 26 | 0.8593 | 0.4058 | 0.0783 |
| Spleen mass | 138 | 0.9181 | 0.0551 | 0.5360 |
Each QTL set was tested independently