Table 2.
Initial selection phenotype data for mutants used for further studies.
| Gene ID in S. Typhimurium LT2 | SGD-K | SGD-C | Gene ID in S. Typhimurium 14028 | Function (known or putative) | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Spleen | Liver | Spleen | Liver | |||||||
| M | FDR | M | FDR | M | FDR | M | FDR | |||
| STM0286 | −0.6 | −0.5 | −1.4 | −0.1 | −2.7 | 0.0 | 0.0 | 1.0 | STM14_0334 | Putative cytoplasmic protein |
| STM0551 | −0.8 | −0.7 | −1.9 | −0.3 | −3.9 | 0.0 | −1.1 | −0.1 | STM14_0643.RJ | Putative diguanylate cyclase/phosphodiesterase domain |
| STM2363 | −0.8 | −0.2 | −1.2 | 0.0 | −4.7 | 0.0 | −8.9 | 0.0 | STM14_2910 | Membrane protein required for colicin V production |
| STM3356 | −1.4 | −0.1 | −1.8 | 0.0 | 1.5 | 0.1 | 0.9 | 0.6 | STM14_4048 | Putative cation transporter |
The data are presented as M-value (log2 ratio of output to input) and FDR (false discovery rate). Red indicates that the mutant is under negative selection. Blue indicates that the mutant is under positive selection. Green indicates FDRs lower than 30%. M-value and rank order data for all assayed genes can be found in Table S1.