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Description of the 123 Clusters Obtained using RepeatExplorer and Annotated as LTR-Retrotransposons, and Their Genome Proportion in the Inbred Sunflower Line HA412-HO
| Superfamily | Family | Number of Clusters | Genome Proportion (%) |
|---|---|---|---|
| Copia | AleI/Retrofit | 2 | 0.688 |
| AleII | 7 | 4.269 | |
| Angela | 5 | 0.610 | |
| Bianca | 3 | 0.126 | |
| Ivana/Oryco | 2 | 0.076 | |
| Maximus/SIRE | 11 | 5.523 | |
| TAR/Tork | 5 | 0.509 | |
| Unknown | 3 | 0.060 | |
| Total | 38 | 11.861 | |
| Gypsy | Athila | 13 | 3.182 |
| Chromovirus | 58 | 23.097 | |
| Ogre/Tat | 14 | 4.241 | |
| Total | 85 | 30.520 |
