Table 4.

Mean Number (and standard error, S.E.) of Illumina Paired Reads (per million) of 8 Cultivars and 7 Wild Genotypes of Sunflower, of which at least One Mapped onto an LTR-RT and the Other onto a Gene Belonging to a Gene Family Represented by at least 100 Sequences in the Sunflower Transcriptome (Rowe and Rieseberg 2013)

Encoded Protein	No. of Sequences	Cultivars		Wild Accessions
		Mean No. of Gene-RT MPR	S.E.	Mean No. of Gene-RT MPR	S.E.
Leucine-Rich-Repeat-related	1,448	3.09	0.19	3.72	0.27	*
ABC-Transporter	425	0.84	0.11	0.94	0.17	ns
DNAJ Homologous	343	0.92	0.09	1.07	0.14	ns
Pentatricopeptide-Repeat	269	0.89	0.12	1.22	0.10	*
S-locus-related	243	0.53	0.07	0.66	0.11	ns
Heat Shock Responsive	222	0.61	0.12	0.76	0.07	ns
NAC Transcription Factor	179	0.70	0.04	0.70	0.08	ns
Terpenoid Cyclases	176	0.35	0.02	0.29	0.06	ns
Clathrin	163	0.26	0.05	0.35	0.06	ns
Alcohol Dehydrogenase	161	0.36	0.05	0.38	0.03	ns
Sodium Transporter	151	0.21	0.03	0.37	0.03	**
Histone	146	0.18	0.02	0.20	0.03	ns
Cellulose Synthase	124	0.13	0.03	0.13	0.02	ns
Aquaporin	117	0.23	0.03	0.26	0.06	ns
Lipid Transfer Protein	101	0,41	0.07	0.38	0.08	Ns

Note.—Each gene family is identified by the encoded protein and for each gene family the number of sequences in the transcriptome is indicated. The significance of differences between cultivars and wild accessions is reported. ns: not significant.

*P < 0.05; **P < 0.01.