Table 1.
Comparison of Diversity Recovered by 16S iTAGs and gyrB phyloTAGs
| Gorilla Sample | Family | Marker | Reads Total | Reads Assigned | 100 (%) | 99 (%) | 98 (%) | 97 (%) | 88 (%) |
|---|---|---|---|---|---|---|---|---|---|
| 5248 | Lachnospiraceae | 16S rDNA | 45,699 | 113 | 56 | 31 | 26 | 22 | — |
| 5249 | Lachnospiraceae | 16S rDNA | 36,604 | 116 | 63 | 42 | 34 | 31 | — |
| 5274 | Lachnospiraceae | 16S rDNA | 46,947 | 196 | 81 | 43 | 36 | 29 | — |
| All | Lachnospiraceae | 16S rDNA | 129,250 | 425 | 155 | 73 | 57 | 48 | — |
| 5248 | Lachnospiraceae | gyrB | 4,395 | 4,395 | 3,591 | 1,170 | 444 | 218 | 98 |
| 5249 | Lachnospiraceae | gyrB | 2,033 | 2,033 | 1,691 | 872 | 242 | 171 | 88 |
| 5274 | Lachnospiraceae | gyrB | 2,013 | 2,013 | 1,719 | 929 | 277 | 176 | 89 |
| All | Lachnospiraceae | gyrB | 8,441 | 8,441 | 6,920 | 3,502 | 866 | 366 | 149 |
| 5248 | Bacteroidaceae | 16S rDNA | — | — | — | — | — | — | — |
| 5249 | Bacteroidaceae | 16S rDNA | — | — | — | — | — | — | — |
| 5274 | Bacteroidaceae | 16S rDNA | — | — | — | — | — | — | — |
| All | Bacteroidaceae | 16S rDNA | — | — | — | — | — | — | — |
| 5248 | Bacteroidaceae | gyrB | 376 | 376 | 85 | 70 | 50 | 38 | 22 |
| 5249 | Bacteroidaceae | gyrB | 446 | 446 | 120 | 110 | 70 | 44 | 31 |
| 5274 | Bacteroidaceae | gyrB | 668 | 668 | 283 | 224 | 116 | 65 | 35 |
| All | Bacteroidaceae | gyrB | 1,490 | 1,490 | 488 | 383 | 207 | 109 | 53 |