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. 2016 Jan 5;11(1):e0145343. doi: 10.1371/journal.pone.0145343

Table 1. Identification of proteins that were differentially represented in the P. psidii uredospore populations from E. grandis (PpEucalyptus) and Psidium guajava (PpGuava).

Accessiona Description Scoreb Ratio c Log Ratio d SDe p valuef
E3L509 1 4 alpha glucan branching enzyme 480.40 1.28 0.25 0.23 0.98
E3L9C1 14 3 3 family protein 12200.67 1.42 0.35 0.12 1.00
E3L0L2 2 isopropylmalate synthase 147.74 1.20 0.18 0.10 1.00
E3KG66 2 methylcitrate dehydratase 399.00 1.42 0.35 0.25 0.99
E3KHM1 26S protease regulatory subunit 8 2686.01 1.12 0.11 0.14 0.95
E3K1H4 26S protease subunit rpt4 2005.47 1.27 0.24 0.16 0.98
E3K877 26S proteasome non-ATPase regulatory subunit 14 1971.74 1.51 0.41 0.16 1.00
E3KKA1 26S proteasome regulatory subunit 6A 2758.75 1.75 0.56 0.13 1.00
E3KZT9 26S proteasome regulatory subunit 7 708.37 1.22 0.20 0.19 0.96
E3JZ59 3 isopropylmalate dehydratase 483.41 1.25 0.22 0.16 1.00
E3L5E7 40S ribosomal protein S1 801.36 PpGuava PpGuava PpGuava PpGuava
E3JWG6 40S ribosomal protein S11 2195.29 0.31 -1.16 0.24 0.00
E3KBT0 40S ribosomal protein S16 1362.80 1.70 0.53 0.23 1.00
E3K5L6 40S ribosomal protein S19 A 7449.16 0.64 -0.44 0.16 0.00
E3JVN0 40S ribosomal protein S21 4844.32 1.62 0.48 0.16 1.00
E3L8H2 40S ribosomal protein S3 675.32 1.60 0.47 0.21 1.00
E3KJL1 40S ribosomal protein S5 506.24 0.66 -0.42 0.27 0.00
E3K826 60S acidic ribosomal protein L10 1395.34 2.41 0.88 0.16 1.00
E3KKV5 60S ribosomal protein L14 1806.10 0.20 -1.59 0.44 0.00
E3KGR6 60S ribosomal protein L23 3152.83 PpGuava PpGuava PpGuava PpGuava
E3KZR5 60S ribosomal protein L9e 687.84 1.37 0.32 0.29 0.98
E3KVF5 Acetyl CoA carboxylase biotin carboxylase 465,35 PpEucalyptus PpEucalyptus PpEucalyptus PpEucalyptus
E3L3M4 Acetyl CoA acetyltransferase 5467.85 1.71 0.54 0.13 1.00
E3KLM7 Acetyl-CoA acyltransferase 2220,71 1.62 0.48 0.15 1.00
E3KL13 Acetylglutamate kinase 256.81 1.14 0.37 0.19 0.99
E3K4I1 Actin 25906.00 1.16 0.15 0.05 1.00
E3JQQ0 Acyl coenzymeA oxidase 384.27 1.46 0.38 0.15 1.00
E3JUV4 Acyl-CoA dehydrogenase 259.56 1.80 0.59 0.22 1.00
E3JPY7 ADP ribosylation factor 1302.03 1.39 0.33 0.23 1.00
E3KWD3 ADP.ATP carrier protein 6064.67 1.27 0.24 0.09 1.00
E3KIY1 AGC/AKT protein kinase 392.41 1.36 0.31 0.24 0.99
E3JT53 Argininosuccinate synthase 2357.95 1.30 0.26 0.15 1.00
E3L109 ASF1 like histone chaperone 521.43 PpEucalyptus PpEucalyptus PpEucalyptus PpEucalyptus
E3KQV7 Aspartate aminotransferase * 3436.00 1.45 0.37 0.11 1.00
E3KQV8 Aspartate aminotransferase * 1152.40 1.62 0.48 0.18 1.00
E3K898 Aspartate tRNA ligase 397.95 1.31 0.27 0.21 0.99
E3KZB7 ATP synthase subunit alpha 15253.20 1.32 0.28 0.05 1.00
E3K357 ATP synthase subunit beta 24197.30 1.28 0.25 0.06 1.00
E3K775 Autocrine motility factor receptor 878.26 2.01 0.70 0.21 1.00
E3KLJ3 Calmodulin 2518.71 1.45 0.37 0.19 0.99
E3JYU7 Capping protein (Actin filament) muscle Z-line. beta 484.72 PpGuava PpGuava PpGuava PpGuava
E3KXV8 Catalase 1294.27 1.22 0.20 0.12 1.00
E3KRP0 cell division cycle protein 48 10137.00 1.25 0.22 0.06 1.00
E3L2Y3 Citrate synthase * 3648.19 1.45 0.37 0.07 1.00
E3KIG5 Citrate synthase * 287.31 PpGuava PpGuava PpGuava PpGuava
E3KQN1 CK1/CK1/CK1-D protein kinase 356.34 PpGuava PpGuava PpGuava PpGuava
E3K4L0 Coronin 335.26 1.28 0.25 0.17 1.00
E3JW29 Cytochrome c 1794.11 1.17 0.16 0.12 1.00
E3L8N2 Cytochrome c oxidase subunit Va 939.33 1.79 0.58 0.46 0.98
E3KXK0 Enolase 13598.00 1.36 0.31 0.08 1.00
E3JRG6 Epsin 3 210.54 PpEucalyptus PpEucalyptus PpEucalyptus PpEucalyptus
E3JUT0 Fructose-bisphosphate aldolase. class II 2168.36 0.68 -0.38 0.19 0.00
E3K026 GDP mannose 4 6 dehydratase 230.21 1.48 0.39 0.22 1.00
E3KEB5 Glucose 1-dehydrogenase 363.08 PpEucalyptus PpEucalyptus PpEucalyptus PpEucalyptus
E3K5I2 Glucose 6 phosphate 1 dehydrogenase 4756.44 1.25 0.22 0.21 0.99
E3L278 Glutathione reductase (NADPH) 679.20 1.27 0.24 0.21 1.00
E3L363 Glycerol 3 phosphate dehydrogenase 1383.98 1.43 0.36 0.12 1.00
E3KA23 Glycyl-tRNA synthetase 443.03 1.16 0.15 0.14 0.99
E3K2A8 GTP-binding nuclear protein spi1 3836.23 1.35 0.30 0.09 1.00
E3KXR7 Guanine nucleotide-binding protein subunit beta-like protein 9323.70 1.36 0.31 0.11 1.00
E3K5H8 Heat shock 70kDa protein 4 1721.81 1.75 0.56 0.09 1.00
E3KZR1 Heat shock protein 60 7677.27 1.54 0.43 0.06 1.00
E3JVS0 Heat shock protein 83 16505.40 1.17 0.16 0.04 1.00
E3KYT3 Heat shock protein HSS1 * 15718.00 1.16 0.15 0.05 1.00
Q01877 Heat shock protein HSS1 * 11951.00 PpGuava PpGuava PpGuava PpGuava
E3K643 Heat shock protein SSB 12675.20 1.27 0.24 0.06 1.00
E3K1Q1 Heme-binding peroxidase 6757.64 1.73 0.55 0.14 1.00
E3L1S2 Histone H2A 7513.68 0.92 -0.08 0.08 0.03
E3KEI6 Histone H2B 6731.25 0.63 -0.47 0.14 0.00
E3JQ71 Histone-binding protein RBBP4 790.83 PpGuava PpGuava PpGuava PpGuava
E3KZR0 Hsp10 like protein 1463.97 1.45 0.37 0.15 1.00
E3JT24 Hsp70-like protein 2010.73 1.45 0.37 0.10 1.00
E3JX32 Hydroxymethylglutaryl CoA synthase 271.48 1.42 0.35 0.20 1.00
E3KHG9 Inorganic pyrophosphatase 8350.30 1.22 0.20 0.09 1.00
E3K023 Isocitrate lyase 821.33 1.19 0.17 0.10 1.00
E3K387 Ketol-acid reductoisomerase, mitochondria 3191.20 1.57 0.45 0.11 1.00
E3L7N3 Long chain fatty acid CoA ligase 1 269.38 PpEucalyptus PpEucalyptus PpEucalyptus PpEucalyptus
E3K352 Malate dehydrogenase * 2264.81 1.82 0.60 0.17 1.00
E3L321 Malate dehydrogenase * 4555.28 1.82 0.60 0.10 1.00
E3KNM2 Mannose 1 phosphate guanyltransferase 2499.70 1.39 0.33 0.13 1.00
E3JQQ5 Minichromosome maintenance protein 3 315.62 1.43 0.36 0.16 1.00
E3JQ11 Mitochondrial processing peptidase subunit beta 597.65 1.55 0.44 0.17 1.00
E3KGF0 Myo-inositol-1-phosphate synthase 290.58 1.43 0.36 0.27 0.99
E3K8H6 NADH dehydrogenase (Ubiquinone) Fe-S protein 3 272.99 1.68 0.52 0.33 1.00
E3LB27 NADH dehydrogenase flavoprotein 2 1752.80 3.49 1.25 0.39 1.00
E3LBN8 Peptidyl-prolyl cis-trans isomerase 416.71 PpEucalyptus PpEucalyptus PpEucalyptus PpEucalyptus
E3JVD3 Phospho 2 dehydro 3 deoxyheptonate aldolase 553.04 PpGuava PpGuava PpGuava PpGuava
E3L907 Phosphoenolpyruvate carboxykinase 5909.17 1.73 0.55 0.11 1.00
E3K5I5 Phosphoglucomutase 1874.05 1.40 0.34 0.12 1.00
E3KDN8 Phosphomannomutase 2918.24 1.63 0.49 0.13 1.00
E3KGF8 Prohibitin 1 1398.25 1.84 0.61 0.16 1.00
E3K554 Proteasome subunit alpha type 2947.92 1.43 0.36 0.20 1.00
E3KIE7 Proteasome subunit beta type 386.94 PpEucalyptus PpEucalyptus PpEucalyptus PpEucalyptus
E3JXB4 Protein transporter SEC23 218.15 1.73 0.55 0.29 1.00
E3KY42 Pyridoxine biosynthesis protein 3497.74 1.22 0.20 0.12 1.00
E3KTX9 Pyruvate carboxylase 1507.30 1.12 0.11 0.07 1.00
E3KSI6 Pyruvate dehydrogenase E1 component subunit alpha 211.05 1.43 0.36 0.17 1.00
E3KF45 Rab family protein 413.58 1.70 0.53 0.32 1.00
E3KHK5 Ribose 5 phosphate isomerase 205.02 1.54 0.43 0.18 1.00
E3KNA3 S25 ribosomal protein 1314.31 PpEucalyptus PpEucalyptus PpEucalyptus PpEucalyptus
E3KNU8 S-adenosylmethionine synthase 1648.47 1.67 0.51 0.17 1.00
E3JXY4 Serine/threonine-protein phosphatase PP1 187.58 1.63 0.49 0.41 1.00
E3JS02 Small COPII coat GTPase 1604.51 1.57 0.45 0.25 1.00
E3KYA0 Small nuclear ribonucleoprotein D3 852.35 PpEucalyptus PpEucalyptus PpEucalyptus PpEucalyptus
E3JQK5 Small nuclear ribonucleoprotein E 2077.40 PpGuava PpGuava PpGuava PpGuava
E3K8I4 Stress induced phosphoprotein 1 532.99 1.36 0.31 0.26 0.99
E3KK64 Succinate dehydrogenase flavoprotein subunit mitochondrial 2231.15 1.49 0.40 0.14 1.00
E3KMN8 Thioredoxin reductase 529.23 1.79 0.58 0.13 1.00
E3JSQ1 Transaldolase 3002.86 1.30 0.26 0.13 1.00
E3JPZ9 Triosephosphate isomerase 7959.44 1.32 0.28 0.09 1.00
E3KK52 Tryptophan synthase 218.58 1.27 0.24 0.13 1.00
E3JT05 Tubulin alpha-1A chain 5271.32 1.16 0.15 0.10 0.99
E3KPL3 Tubulin beta chain 18116.00 1.45 0.37 0.04 1.00
E3K479 tubulin binding cofactor A 689.77 1.51 0.41 0.21 1.00
E3KA35 U6 snRNA-associated Sm-like protein LSm3 1905.08 1.36 0.31 0.33 0.97
E3KBL0 Ubiquitin-activating enzyme E1 515.66 1.26 0.23 0.14 1.00
E3KLK1 Ubiquitin-conjugating enzyme E2 N 1681.96 1.52 0.42 0.21 1.00
E3K7I4 UDP-glucose 4-epimerase 358.18 0.77 -0.26 0.22 0.03
E3K0X4 UDP-glucose 6-dehydrogenase 3766.77 1.19 0.17 0.08 1.00
E3L4X0 UTP-glucose-1-phosphate uridylyltransferase 2906.12 1.32 0.28 0.07 1.00
E3L015 Vacuolar type proton ATPase catalytic subunit A 6515.19 1.20 0.18 0.08 1,00

a Access ID is the access identification of the protein in the Uniprot database (http://www.uniprot.org/ release Version 2014_08).

b The score of protein expression analysis

c and d Ratio and the Log (PpGuava/PpEucalyptus) of quantified proteins respectively

e Standard Deviation (SD) of the Log of PpGuava/PpEucalyptus ratio and fp-value of Log of PpGuava/PpEucalyptus ratio obtained from PLGS 2.5.1.

A p value ≤0.05 identifies proteins less abundant, whereas a p value ≥0.95 identifies proteins more abundant in PpGuava than in PpEucalyptus; p value identifies proteins that were unique to either the PpEucalyptus or PpGuava P. psidii uredospore populations isolated from eucalyptus and guava, respectively.

* Variant proteins.