TABLE 1.
Patient characteristics
Patient ID | Genotype | Viral load (IU/ml) | Sequencea |
|||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A | L | S | T | T | G | E | I | P | F | Y | G | K | A | I | P | |||
138 | 1a | 2,148,000 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
154 | 1a | 777,200 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
175 | 1a | 2,200,000 | . | . | P | . | . | . | . | . | . | . | . | . | . | . | . | . |
251 | 1a | 61,790 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
278 | 1a | 3,015,000 | . | . | . | . | . | . | . | V | . | . | . | . | . | . | . | . |
283 | 1a | 2,422,000 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
299 | 1a | 275,700 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
324 | 1a | 2,469,000 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
348 | 1a | 83,080 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
393 | 1a | 5,282,000 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
408 | 1a | 1,562,000 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
423 | 1a | 320,900 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
581 | 1a | 3,942,000 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
084 | 1b | 61,550 | . | . | . | N | I | . | . | . | . | . | . | . | . | . | . | . |
117 | 1b | 1,033,000 | . | . | . | N | I | . | . | V | . | . | . | . | . | . | . | . |
332 | 1b | 220,000 | . | . | . | N | . | . | . | . | . | . | . | . | . | . | . | . |
096 | 3a | 247,700 | . | . | G | S | E | . | . | . | . | . | . | . | . | . | . | . |
113 | 3a | 2258,000 | . | . | G | S | E | . | . | . | . | . | . | . | . | . | . | . |
122 | 3a | 87,400 | . | . | G | S | E | . | . | . | . | . | . | . | . | . | . | . |
137 | 3a | 1,046,000 | . | . | G | S | E | . | . | . | . | . | . | . | . | . | . | . |
176 | 3a | 924,700 | . | . | G | S | E | . | . | . | . | . | . | . | . | . | . | . |
206 | 3a | 368,000 | . | . | G | S | E | . | . | . | . | . | . | . | . | . | L | . |
240 | 3a | 154,500 | . | . | G | S | E | . | . | . | . | . | . | . | . | . | . | . |
257 | 3a | 3,642 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
274 | 3a | 146,300 | . | . | G | S | E | . | . | V | . | . | . | . | . | . | . | . |
292 | 3a | 80,690 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
466 | 3a | 34,010,000 | . | . | G | S | E | . | . | . | . | . | . | . | . | . | . | . |
533 | 3a | 511,500 | . | . | G | S | D | . | . | . | . | . | . | . | R | . | . | . |
042 | RNA negb | |||||||||||||||||
062 | RNA neg | |||||||||||||||||
110 | RNA neg | |||||||||||||||||
161 | RNA neg | |||||||||||||||||
196 | RNA neg | |||||||||||||||||
242 | RNA neg | |||||||||||||||||
264 | RNA neg | |||||||||||||||||
286 | RNA neg | |||||||||||||||||
344 | RNA neg | |||||||||||||||||
365 | RNA neg | |||||||||||||||||
417 | RNA neg | |||||||||||||||||
418 | RNA neg | |||||||||||||||||
474 | RNA neg | |||||||||||||||||
574 | RNA neg | |||||||||||||||||
587 | RNA neg |
The H77 prototype sequence is indicated in the column subheadings. Differences from the prototype sequence are specified by the appropriate letter in the table. A period indicates no difference from the prototype sequence. –, Not done.
RNA neg, RNA negative.