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. 2015 Nov 20;44(Database issue):D925–D931. doi: 10.1093/nar/gkv1263

Table 1. Data repositories containing omics data relevant to hematopoietic differentiation that comprise the foundation of SBR-Blood.

Repository, URL Lineage Focus
Data Focus
Analysis Focus
BloodChIP (14), http://149.171.101.136/python/BloodChIP/index.html Hematopoiesis (Human)
Expression/Epigenetic/Annotations
Information Lookup
BloodExpress (8), http://hscl.cimr.cam.ac.uk/bloodexpress/ Hematopoiesis (Mouse)
Expression/Annotations
Information Lookup, Population Correlations
CODEX (13), http://codex.stemcells.cam.ac.uk Hematopoiesis (Human/Mouse)
Expression/Epigenetic/Annotations
Information Lookup, Experiment Correlations
ENCODE (11), http://encodeproject.org/ENCODE/ Hematopoiesis (Human)
Expression/Epigenetic/Annotations
Information Lookup, Data Storage
EpoDB (1517), http://www.cbil.upenn.edu/EpoDB/ Erythropoiesis (Vertebrates)
Sequence/Annotations
Information Lookup, Sequence Analysis
ErythronDB (18,19), http://www.cbil.upenn.edu/ErythronDB/ Erythropoiesis (Mouse)
Expression/Regulation/Annotations
Information Lookup
HAEMCODE (12), http://haemcode.stemcells.cam.ac.uk Hematopoiesis (Mouse)
Epigenetic/Annotations
Information Lookup, Experiment Correlations
Hembase (20), http://hembase.niddk.nih.gov/ Erythropoiesis (Human)
Expression/Annotations
Information Lookup
HemoPDB (21), http://bioinformatics.wistar.upenn.edu/HemoPDB Hematopoiesis (Vertebrates)
Regulation/Annotations
Information Lookup
ImmGen (9), http://www.immgen.org/ Hematopoiesis (Human/Mouse)
Expression/Annotations
Information Lookup, Data Storage, Population Correlations
LymphTF-DB (22), http://www.iupui.edu/∼tfinterx/ Lymphopoiesis (Mouse)
Regulation/Annotations
Information Lookup
NCBI GEO (10), http://www.ncbi.nlm.nih.gov/geo/ Hematopoiesis (Vertebrates)
Expression/Epigenetic/Annotations
Information Lookup, Data Storage