Table 3.
Phylogenetic identification results of selected denaturing gradient gel electrophoresis (DGGE) bands from fungal DGGE profiles in Fig. 21)
| Band no.2) | Similar strain (NCBI accession no.) | Similarity (%) | Classification3) |
|---|---|---|---|
| Band-1 | Phialocephala repens (EU434874) | 98 | Pezizomycotina |
| Band-2 | Uncultured fungus (JN166410.1) | 99 | Fungi |
| Band-3 | Trichosporon pullulans (AB001766) | 100 | Cystofilobasidiaceae; Guehomyces |
| Band-4 | Fusarium fujikuroi (HF679024) | 99 | Hypocreales; Nectriaceae; Fusarium |
| Band-5 | Creolimax fragrantissima (EU124916) | 93 | Ichthyophonida; Creolimax |
| Band-6 | Cryptococcus humicolus (AB035587) | 100 | Tremellaceae; Asterotremella |
| Band-7 | Mortierella alpina (AY546097) | 99 | Mortierellaceae; Mortierella |
| Band-8 | Fusarium oxysporum (HM210090) | 98 | Hypocreales; Nectriaceae; Fusarium |
| Band-9 | Rhizomucor endophyticus (HM623313) | 97 | Mucorineae; Mucoraceae; Mucor |
| Band-10 | Hymenoscyphus sp. (KC164672.1) | 99 | Helotiales; Helotiaceae |
| Band-11 | Phacidium lacerum (DQ471028) | 99 | Phacidiaceae; Phacidium |
| Band-12 | Acremonium recifei (HQ232206) | 97 | Hypocreales; Acremonium |
| Band-13 | Clonostachys rosea (GU112755) | 99 | Bionectriaceae; Clonostachys |
| Band-14 | Tetrachaetum elegans (AY357280) | 98 | Ascomycota; Tetrachaetum |
| Band-15 | Alicorhagia sp. (KF650049.1) | 99 | Metazoa; Alicorhagiidae |
| Band-16 | Uncultured Hygrophoraceae (EU300937.1) | 99 | Dikarya; Hygrophoraceae |
| Band-17 | Kionochaeta sp. (AB521038) | 100 | Sordariomycetidae; Kionochaeta |
| Band-18 | Tullbergia yosii (DQ016556) | 97 | Tullbergiinae; Tullbergia |
| Band-19 | Rheomorpha neiswestonovae (AY527049) | 95 | Lumbricina; Aeolosomatidae |
| Band-20 | Hemienchytraeus sp.(GU901905.1) | 99 | Metazoa; Enchytraeidae |
| Band-21 | Tardigrada sp. (AJ617459.2) | 99 | Metazoa; Tardigrada |
| Band-22 | Odontolaimus sp. (FJ969131.1) | 93 | Metazoa; Oxystominidae |
| Band-23 | Botryosphaeria mamane (KF531821) | 97 | Botryosphaeriaceae; Botryosphaeria |
| Band-24 | Hymenoscyphus scutula (AY789430) | 95 | Helotiales; Helotiaceae |
| Band-25 | Uncultured Lecythophora sp. (HQ424852.1) | 99 | Hypocreales; Clavicipitaccae |
1)
Only the highest homology matches are presented
2)
Bands are numbered according to Fig. 2
3)
Classification represents phylum, class, order, and family to which a similar strain belongs