Table 2.

Genes involved in CNVs related to in heart development

Data resource	Gene number	Hit no./total gene	Gene list for gain (172 genes) in our study	Gene list for loss (113 genes) in our study
MGI database	147	7/285	PAX3, LBX1	CRKL b, GP1BB b, PDLIM3, TBX1 b, TXNRD2 b
Candidate genes§	202	9/285	PAX3, LBX1, MYH11, FGF12	CASP3, CRKL b, PDLIM3, TBX1 b, TXNRD2 b
Genes derived from GO:0072538 (cardiovascular system development)	1957	9/285	PAX3, LBX1, MYH11, PRKCB, IGFBP7	CYSLTR1, LPAR4, CRKL b, TBX1 b, TXNRD2 b

^§CHD wiki (47 genes), UCSC Genome Browser (104 genes), literatures (51genes); the overlapping genes between different datasets were merged. ^bgenes which were included in CNVs related to DiGeorge syndrome