Table 1. Impact on CacKam activity and ligand interactions of residue substitutions around the SAM-binding pocket.
Amino acid substitution | Kanamycin MIC (μg/ml) | Ligand bindinga,b | |
---|---|---|---|
SAM Kd (μM) | SAH Kd (μM) | ||
- | >1024 | 44 | 2.7 |
D36A | 8 | NB | NB |
D61A | 8 | NB | NB |
R66A | 512 | 21 | 2.9 |
E94A | 16 | 29 | 2.2 |
K115A | 256 | 48 | 5.0 |
S201A | 16 | 110 | 1.6 |
S202A | 8 | 24 | 2.9 |
R43A/R73A | 16 | 35 | 2.4 |
W113A | 16 | 31 | 1.9 |
W113F | 16 | 103 | 11 |
W203A | 16 | 68 | 5.1 |
W203F | 16 | 24 | 1.9 |
aData for wild-type CacKam are from reference (19).
bNB, denotes no binding detected.