Table 3.
RH Clones | Comparison between p6* and p6 | Comparison between p6* and p16* | |||||
---|---|---|---|---|---|---|---|
| |||||||
N1 | p6* drop-out (%) | p6 drop-out (%) | Concordance (%) | p6* drop-out (%) | p16* drop-out (%) | Concordance (%) | |
MAEA | 4 | 0.0 | 25.0 | 75.0 | 0.0 | 25.0 | 75.0 |
GRPEL1 | 4 | 0.0 | 0.0 | 100.0 | 0.0 | 25.0 | 75.0 |
SORCS2 | 5 | 0.0 | 20.0 | 80.0 | 0.0 | 40.0 | 60.0 |
MORF4 | 3 | 0.0 | 33.3 | 66.7 | 0.0 | 33.3 | 66.7 |
MAN2B2 | 6 | 0.0 | 33.3 | 66.7 | 0.0 | 66.7 | 33.3 |
STX18 | 3 | 0.0 | 0.0 | 100.0 | 0.0 | 33.3 | 66.7 |
DRD5 | 4 | 25.0 | 25.0 | 50.0 | 0.0 | 66.7 | 33.3 |
D4S1582 | 6 | 16.7 | 16.7 | 66.7 | 0.0 | 20.0 | 80.0 |
HS3ST1 | 3 | 0.0 | 0.0 | 100.0 | 25.0 | 0.0 | 75.0 |
HS3ST1_1 | 7 | 28.6 | 28.6 | 42.9 | 20.0 | 20.0 | 60.0 |
RAB28 | 6 | 16.7 | 16.7 | 66.7 | 25.0 | 25.0 | 50.0 |
CPEB2 | 6 | 0.0 | 16.7 | 83.3 | 0.0 | 66.7 | 33.3 |
GBA3 | 4 | 0.0 | 0.0 | 100.0 | 0.0 | 50.0 | 50.0 |
RBPSUH | 4 | 0.0 | 25.0 | 75.0 | 0.0 | 25.0 | 75.0 |
STIM2 | 5 | 20.0 | 40.0 | 40.0 | 0.0 | 0.0 | 100.0 |
PCDH7 | 5 | 20.0 | 0.0 | 80.0 | 0.0 | 25.0 | 75.0 |
TBC1D1 | 4 | 25.0 | 0.0 | 75.0 | 0.0 | 0.0 | 100.0 |
KIAA1239 | 7 | 28.6 | 0.0 | 71.4 | 0.0 | 50.0 | 50.0 |
KLF3 | 6 | 0.0 | 0.0 | 100.0 | 0.0 | 100.0 | 0.0 |
LIAS | 5 | 0.0 | 0.0 | 100.0 | 0.0 | 100.0 | 0.0 |
RHOH | 3 | 0.0 | 0.0 | 100.0 | 0.0 | 33.3 | 66.7 |
AB047909 | 5 | 0.0 | 0.0 | 100.0 | 0.0 | 60.0 | 40.0 |
CCNI | 5 | 0.0 | 0.0 | 100.0 | 0.0 | 20.0 | 80.0 |
SHROOM3 | 5 | 20.0 | 0.0 | 80.0 | 0.0 | 0.0 | 100.0 |
ART3 | 5 | 0.0 | 0.0 | 100.0 | 0.0 | 20.0 | 80.0 |
PPEF2 | 7 | 14.3 | 14.3 | 71.4 | 0.0 | 66.7 | 33.3 |
RCHY1 | 4 | 0.0 | 0.0 | 100.0 | 0.0 | 25.0 | 75.0 |
PPBP | 6 | 16.7 | 16.7 | 66.7 | 20.0 | 40.0 | 40.0 |
EPHA5 | 6 | 0.0 | 50.0 | 50.0 | 0.0 | 66.7 | 33.3 |
LPHN3 | 5 | 0.0 | 0.0 | 100.0 | 0.0 | 20.0 | 80.0 |
IGFBP7 | 6 | 0.0 | 0.0 | 100.0 | 0.0 | 66.7 | 33.3 |
REST | 7 | 0.0 | 0.0 | 100.0 | 0.0 | 42.9 | 57.1 |
AB050266 | 5 | 20.0 | 0.0 | 80.0 | 0.0 | 50.0 | 50.0 |
KDR | 4 | 0.0 | 0.0 | 100.0 | 0.0 | 25.0 | 75.0 |
KIT | 6 | 16.7 | 0.0 | 83.3 | 0.0 | 60.0 | 40.0 |
LNX | 6 | 16.7 | 0.0 | 83.3 | 0.0 | 80.0 | 20.0 |
SPATA18 | 5 | 0.0 | 0.0 | 100.0 | 0.0 | 20.0 | 80.0 |
DCUN1D4 | 7 | 0.0 | 0.0 | 100.0 | 0.0 | 50.0 | 50.0 |
SOAT | 6 | 16.7 | 33.3 | 50.0 | 0.0 | 100.0 | 0.0 |
KLHL8 | 4 | 25.0 | 0.0 | 75.0 | 0.0 | 100.0 | 0.0 |
AB047948 | 5 | 40.0 | 0.0 | 60.0 | 0.0 | 100.0 | 0.0 |
UCP1 | 4 | 25.0 | 25.0 | 50.0 | 0.0 | 100.0 | 0.0 |
ARHGAP10 | 3 | 0.0 | 0.0 | 100.0 | 0.0 | 33.3 | 66.7 |
CCNA2 | 7 | 71.4 | 14.3 | 14.3 | 0.0 | 50.0 | 50.0 |
HSP90AA6P | 8 | 0.0 | 12.5 | 87.5 | 0.0 | 75.0 | 25.0 |
ANP32C | 4 | 0.0 | 0.0 | 100.0 | 0.0 | 50.0 | 50.0 |
| |||||||
Average | 10.1 | 9.7 | 80.2 | 2.0 | 46.2 | 51.8 |
This table summarizes the concordances from Supplementary Table 1. N is the number of clones harboring the marker