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. Author manuscript; available in PMC: 2016 Jun 10.
Published in final edited form as: J Comput Graph Stat. 2015 Dec 10;24(4):975–993. doi: 10.1080/10618600.2014.948179

Table 2.

SigClust p-values for each pair of subtypes for the BRCA data. The known class labels are used to calculate the cluster index.

Basal.LumA Basal.LumB Basal.Her2 LumA.LumB Her2.LumB Her2.LumA
Sample < 0.001 < 0.001 0.015 1 0.99 0.77
Hard < 0.001 < 0.001 < 0.001 0.89 0.051 < 0.001
Soft < 0.001 < 0.001 < 0.001 1 0.95 0.059