Table 4. Intraclass Correlation Coefficient values.

	FSL-FreeSurfer FLAIR	FSL-FreeSurfer no FLAIR	FSL-SPM	FreeSurfer FLAIR- SPM	FreeSurfer no FLAIR- SPM
L-Insula	0.923	0.915	0.915	0.896	0.892
R-Insula	0.463	0.46	0.529	0.838	0.835
L-Parietal	0.771	0.779	0.8	0.88	0.894
R-Parietal	0.75	0.763	0.778	0.83	0.86
L-Temporal	0.951	0.963	0.957	0.942	0.951
R-Temporal	0.86	0.875	0.865	0.917	0.952
L-Occipital	0.512	0.524	0.786	0.689	0.701
R-Occipital	0.464	0.468	0.688	0.767	0.782
L-Cingulate	0.718	0.717	0.775	0.796	0.799
R-Cingulate	0.772	0.776	0.866	0.803	0.808
L-Frontal	0.84	0.846	0.843	0.952	0.96
R-Frontal	0.841	0.843	0.846	0.946	0.959
L—Accumbens	0.654	0.654
R—Accumbens	0.444	0.444
L—Amygdala	0.386	0.386	0.375	0.64	0.64
R—Amygdala	0.197	0.197	0.318	0.519	0.519
L—Caudate	0.908	0.908	0.896	0.879	0.879
R—Caudate	0.938	0.938	0.893	0.899	0.899
L—Hippocampus	0.658	0.658	0.575	0.831	0.831
R—Hippocampus	0.59	0.59	0.57	0.809	0.809
L—Pallidum	0.959	0.959	0.125	0.017	0.017
R—Pallidum	0.624	0.624	-0.042	-0.165	-0.165
L—Putamen	0.687	0.687	0.713	0.637	0.637
R—Putamen	0.781	0.781	0.618	0.68	0.68
L—Thalamus	0.777	0.777	0.586	0.319	0.319
R—Thalamus	0.774	0.774	0.666	0.548	0.548