Table 3.
Nucleotide content and gene count levels of chromosome
| Attribute | Genome (total) |
|
|---|---|---|
| Value | % of total | |
| Size (bp) | 4,261,752 | 100 |
| G+C content (bp) | 1,611,220 | 37.9 |
| Coding sequence size (bp) | 3,718,423 | 87.3 |
| Extrachromosomal elements | 0 | 0 |
| Total genes | 3,288 | 100 |
| RNA genes | 61 | 1.9 |
| Protein-coding genes | 3,227 | 98.1 |
| Genes with function prediction | 1,807 | 55.9 |
| Genes assigned to COGs | 1,380 | 42.8 |
| Protein with peptid signal | 1,024 | 31.7 |
| Genes with transmembrane helices | 627 | 19.4 |
| No of antibiotic resistant genes | 0 | 0 |
| Genes associated with PKS or NRPS | 7 | 0.21 |
| No. of genes with Pfam-A domains | 2,907 | 88.41 |
| No. of CRISPRs | 1 | 0.03 |
COGs, Clusters of Orthologous Groups database; CRISPR, clustered regularly interspaced short palindromic repeat.