Table 7.

Pairwise comparison of Gabonia massiliensis with eight other species^a

	Alistipes finegoldii	Alistipes shahii	Bacteroides dorei	Bacteroides fragilis	Bacteroides salanitronis	Barnesiella viscericola	Gabonia massiliensis	Ornithobacterium rhinotracheale	Helicobacter pylori
Alistipes finegoldii	100% ± 00	30.5% ± 2.99	39.1% ± 2.54	35% ± 2.54	30.1% ± 2.54	25.6% ± 2.54	24.7% ± 2.52	32.9% ± 2.53	15.5% ± 2.52
Alistipes shahii		100% ± 00	28.8% ± 2.53	45.4% ± 2.54	31.4% ± 2.54	26.7% ± 2.54	25.1% ± 2.52	45.5% ± 2.53	15.3% ± 2.52
Bacteroides dorei			100% ± 00	26.9% ± 2.59	22.3% ± 2.58	23% ± 2.55	23.2% ± 2.54	27.1% ± 2.53	15.6% ± 2.52
Bacteroides fragilis				100% ± 00	28.4% ± 2.56	34.8% ± 2.56	24.1% ± 2.54	41% ± 2.54	15.4% ± 2.52
Bacteroides salanitronis					100% ± 00	30.6% ± 2.58	22.9% ± 2.54	39.1% ± 2.55	15.2% ± 2.52
Barnesiella viscericola						100% ± 00	20.9% ± 2.54	38% ± 2.55	15.1% ± 2.53
Gabonia massiliensis							100% ± 00	23.9% ± 2.52	15.3% ± 2.52
Ornithobacterium rhinotracheale								100% ± 00	17.9% ± 2.52
Helicobacter pylori									100% ± 00

GGDC, Genome-to-Genome Distance Calculator; DDH, DNA-DNA hybridization.

^aData were generated using GGDC, formula 2 (DDH estimates based on identities/HSP length). Confidence intervals indicate inherent uncertainty in estimating DDH values from intergenomic distances based on models derived from empirical test data sets (which are always limited in size). These results are in accordance with the 16S rRNA (Fig. 1) and phylogenomic analyses as well as GGDC results.