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. 2016 Jan 13;6:1537. doi: 10.3389/fmicb.2015.01537

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Copyright © 2016 Breidenbach, Pump and Dumont.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Principal coordinates analysis (PCoA) of 16S rRNA gene OTUs assigned to major microbial phyla detected in Vercelli rice field soil. Bulk soil samples are depicted with filled symbols and rhizosphere samples with open symbols. The ANOSIM statistic was applied to the ordinations to test for differences between rhizosphere and bulk soil communities, with corresponding R- and P-values shown; the last two plots show the R- and P-values based on differences between sampling times for Firmicutes and Archaea respectively.